C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH2 domain containing 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152292 SH2D6 9606 + 2:85418721-85437029 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000340326 SH2D6-001 85434795-85437029 protein_coding
  ENST00000389938 SH2D6-002 85418931-85437027 protein_coding
  ENST00000469800 SH2D6-003 85418721-85422692 processed_transcript
  ENST00000474753 SH2D6-007 85421400-85422470 processed_transcript
  ENST00000477170 SH2D6-005 85434066-85437027 processed_transcript
  ENST00000481395 SH2D6-009 85429576-85436885 retained_intron
  ENST00000481426 SH2D6-008 85430382-85436921 processed_transcript
  ENST00000488219 SH2D6-006 85435420-85436738 processed_transcript
  ENST00000488657 SH2D6-004 85420855-85430040 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340326ENST00000389938ENST00000469800ENST00000474753ENST00000477170ENST00000481426ENST00000488219ENST00000488657
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340326 N/A N/A N/A N/A 0.299±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000389938 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A 0.744±0.44
ENST00000469800 N/A N/A N/A N/A 0.477±0.00 N/A N/A N/A N/A N/A 0.436±0.29 0.064±0.00 N/A
ENST00000474753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A N/A
ENST00000477170 N/A N/A 0.259±0.00 N/A 0.314±0.00 N/A N/A N/A N/A 0.171±0.00 0.072±0.00 N/A N/A
ENST00000481426 N/A N/A 0.406±0.00 N/A 0.277±0.15 N/A N/A 0.205±0.00 N/A N/A 0.059±0.02 N/A N/A
ENST00000488219 N/A 0.177±0.00 N/A N/A 0.993±0.00 N/A N/A N/A 0.126±0.00 N/A 0.153±0.00 N/A N/A
ENST00000488657 0.260±0.00 0.502±0.00 0.454±0.00 0.498±0.00 N/A 0.211±0.00 0.483±0.00 0.860±0.00 0.388±0.00 N/A 0.066±0.00 N/A 1.216±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AX CIL_0009AX_0001 VISTA 2:84977509-85579132

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090607 SH2D6 SH2 domain containing 6 protein_coding Danio_rerio
ENSMUSG00000052631 Sh2d6 SH2 domain containing 6 protein_coding Mus_musculus

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