C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH2 domain containing 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052631 Sh2d6 10090 - 6:72513644-72521634 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000089687 Sh2d6-201 72513654-72520538 protein_coding
  ENSMUST00000159577 Sh2d6-005 72513644-72515290 processed_transcript
  ENSMUST00000159877 Sh2d6-002 72513656-72520650 protein_coding
  ENSMUST00000160123 Sh2d6-004 72515327-72519977 processed_transcript
  ENSMUST00000160761 Sh2d6-003 72517409-72521634 retained_intron
  ENSMUST00000162561 Sh2d6-001 72513656-72520627 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089687ENSMUST00000159577ENSMUST00000159877ENSMUST00000160123ENSMUST00000160761ENSMUST00000162561
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089687 0.150±0.04 0.158±0.04 N/A 0.122±0.08 0.065±0.02 2.248±1.01 0.066±0.03 0.046±0.01 0.012±0.01 0.101±0.08 0.542±0.00 0.198±0.12 0.044±0.04 0.175±0.00
ENSMUST00000159577 N/A N/A N/A 0.377±0.00 N/A N/A N/A N/A N/A 0.311±0.00 N/A 0.501±0.00 N/A N/A
ENSMUST00000159877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.221±0.69
ENSMUST00000160123 0.081±0.00 0.219±0.06 N/A N/A 0.103±0.06 N/A N/A N/A N/A N/A N/A 0.091±0.06 0.084±0.03 N/A
ENSMUST00000160761 0.209±0.00 N/A N/A 0.345±0.00 0.059±0.01 1.824±0.00 0.044±0.00 0.108±0.07 0.021±0.00 0.066±0.02 0.909±0.24 0.101±0.00 N/A N/A
ENSMUST00000162561 0.130±0.00 N/A 0.584±0.00 N/A 0.090±0.00 1.172±0.41 N/A N/A N/A 0.104±0.00 N/A N/A N/A 7.845±1.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WR CIL_0007WR_0002 VISTA 6:71915186-72518828
CIL_00084P CIL_00084P_0002 VISTA 6:71915200-72518764
CIL_0009AX CIL_0009AX_0002 VISTA 6:72353769-72955984

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090607 SH2D6 SH2 domain containing 6 protein_coding Danio_rerio
ENSG00000152292 SH2D6 SH2 domain containing 6 protein_coding Homo_sapiens

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