C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C-type lectin domain family 4, member F
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152672 CLEC4F 9606 - 2:70808643-70820600 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000272367 CLEC4F-001 70808643-70820600 protein_coding
  ENST00000426626 CLEC4F-002 70808813-70820547 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000272367ENST00000426626
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000272367 N/A N/A N/A 0.126±0.00 0.269±0.00 0.068±0.00 N/A N/A N/A 0.214±0.00 N/A 0.223±0.16 0.021±0.00 0.257±0.00
ENST00000426626 0.054±0.00 0.043±0.00 0.211±0.00 0.036±0.00 0.035±0.00 0.064±0.00 0.021±0.01 0.282±0.00 0.059±0.00 0.054±0.00 0.287±0.00 0.108±0.00 0.013±0.00 0.087±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZA CIL_0006ZA_0002 CGP 2:70808643-70835822

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005534 IEA galactose binding
GO:0005886 IEA plasma membrane
GO:0006897 IEA endocytosis
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0051132 IEA NK T cell activation
GO:0051861 IEA glycolipid binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000046142 protein_coding Danio_rerio
ENSDARG00000090945 si:ch211-170d8.8 si:ch211-170d8.8 protein_coding Danio_rerio
ENSMUSG00000014542 Clec4f C-type lectin domain family 4, member f protein_coding Mus_musculus

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