C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C-type lectin domain family 4, member f
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000014542 Clec4f 10090 - 6:83644542-83656187 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000014686 Clec4f-001 83644542-83656187 protein_coding
  ENSMUST00000137647 Clec4f-002 83645217-83656119 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000014686ENSMUST00000137647
Transcript ID Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000014686 0.028±0.00 0.009±0.00 0.021±0.00 0.033±0.02 0.012±0.00 14.740±9.85 0.015±0.00 0.057±0.02 0.022±0.02 0.028±0.01
ENSMUST00000137647 N/A N/A N/A 0.079±0.01 N/A 5.602±4.78 N/A N/A 0.064±0.03 0.145±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZA CIL_0006ZA_0003 CGP 6:83644542-83677857

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005534 IDA galactose binding
GO:0005886 IDA plasma membrane
GO:0006897 IEA endocytosis
GO:0016021 IEA integral component of membrane
GO:0051132 IMP NK T cell activation
GO:0051861 IDA glycolipid binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000046142 protein_coding Danio_rerio
ENSDARG00000090945 si:ch211-170d8.8 si:ch211-170d8.8 protein_coding Danio_rerio
ENSG00000152672 CLEC4F C-type lectin domain family 4, member F protein_coding Homo_sapiens

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