C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: utrophin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152818 UTRN 9606 + 6:144285701-144853034 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000367524 UTRN-007 144789229-144828851 protein_coding
  ENST00000367525 UTRN-008 144659844-144678552 protein_coding
  ENST00000367526 UTRN-010 144583210-144851003 protein_coding
  ENST00000367545 UTRN-001 144291829-144853034 protein_coding
  ENST00000417142 UTRN-005 144797745-144835830 protein_coding
  ENST00000421035 UTRN-002 144344101-144426328 protein_coding
  ENST00000432686 UTRN-004 144797745-144828855 protein_coding
  ENST00000433557 UTRN-003 144285701-144403184 protein_coding
  ENST00000455022 UTRN-006 144799381-144835938 protein_coding
  ENST00000460618 UTRN-011 144839049-144846822 processed_transcript
  ENST00000465299 UTRN-009 144836373-144837244 processed_transcript
  ENST00000480333 UTRN-012 144754714-144758310 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367526ENST00000367545
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367526 N/A N/A 3.625±0.00 N/A N/A N/A N/A N/A N/A N/A 5.326±0.86 6.793±0.00 8.023±1.43
ENST00000367545 18.916±0.00 1.816±0.00 1.443±0.00 6.488±2.90 4.421±0.66 5.488±3.25 3.842±1.56 3.746±3.39 8.142±3.53 2.005±0.53 3.470±2.16 2.402±0.17 2.296±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030K CIL_00030K_0002 CGP 6:144285701-145736024

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001954 IMP positive regulation of cell-matrix adhesion
GO:0003779 IDA actin binding
GO:0005178 IPI integrin binding
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0006936 TAS muscle contraction
GO:0007517 TAS muscle organ development
GO:0008270 IEA zinc ion binding
GO:0016010 IEA dystrophin-associated glycoprotein complex
GO:0016020 TAS membrane
GO:0017166 IPI vinculin binding
GO:0019901 IPI protein kinase binding
GO:0030054 IEA cell junction
GO:0030175 IDA filopodium
GO:0031527 IDA filopodium membrane
GO:0031594 IEA neuromuscular junction
GO:0043234 IDA protein complex
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane
GO:0070062 IDA extracellular vesicular exosome
GO:0070938 IDA contractile ring
GO:2000649 ISS regulation of sodium ion transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090078 UTRN utrophin protein_coding Danio_rerio
ENSMUSG00000019820 Utrn utrophin protein_coding Mus_musculus

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