C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: utrophin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367545 UTRN-001 ENSG00000152818 9606 + 6:144291829-144853034 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367545
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367545 18.916±0.00 1.816±0.00 1.443±0.00 6.488±2.90 4.421±0.66 5.488±3.25 3.842±1.56 3.746±3.39 8.142±3.53 2.005±0.53 3.470±2.16 2.402±0.17 2.296±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030K CIL_00030K_0002 CGP 6:144285701-145736024

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001954 IMP positive regulation of cell-matrix adhesion
GO:0003779 IDA actin binding
GO:0005178 IPI integrin binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0006936 TAS muscle contraction
GO:0007517 TAS muscle organ development
GO:0008270 IEA zinc ion binding
GO:0016010 IEA dystrophin-associated glycoprotein complex
GO:0016020 TAS membrane
GO:0017166 IPI vinculin binding
GO:0019901 IPI protein kinase binding
GO:0030054 IEA cell junction
GO:0030175 IDA filopodium
GO:0031527 IDA filopodium membrane
GO:0031594 IEA neuromuscular junction
GO:0043234 IDA protein complex
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane
GO:0070062 IDA extracellular vesicular exosome
GO:0070938 IDA contractile ring
GO:2000649 ISS regulation of sodium ion transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076817 Utrn-201 protein_coding Mus_musculus 0 11450

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