C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB3C, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152932 RAB3C 9606 + 5:58582221-58859394 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000282878 RAB3C-001 58583040-58859394 protein_coding
  ENST00000381158 RAB3C-004 58788279-58851527 processed_transcript
  ENST00000507977 RAB3C-003 58644364-58794531 processed_transcript
  ENST00000513316 RAB3C-002 58582221-58617871 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000282878ENST00000381158ENST00000507977ENST00000513316
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000282878 0.956±0.00 0.441±0.00 N/A 13.385±3.49 0.497±0.20 0.610±0.00 0.027±0.02 N/A 0.114±0.04 N/A N/A 0.115±0.07 0.044±0.00 0.112±0.04
ENST00000381158 4.388±0.00 1.712±0.00 N/A N/A N/A N/A N/A N/A 0.522±0.00 0.655±0.00 0.338±0.00 1.018±0.00 0.238±0.00 1.163±0.17
ENST00000507977 N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A 0.327±0.05 N/A N/A 0.022±0.00 N/A N/A
ENST00000513316 N/A N/A N/A N/A 2.255±0.00 1.544±0.00 N/A 0.450±0.00 1.020±0.36 N/A N/A 1.641±1.51 0.755±0.01 1.557±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IDA:IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0006184 IDA:IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008021 IEA synaptic vesicle
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0017157 IEA regulation of exocytosis
GO:0019882 IMP antigen processing and presentation
GO:0031489 IPI myosin V binding
GO:0031982 IDA vesicle
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014462 rab3c RAB3C, member RAS oncogene family protein_coding Danio_rerio
ENSMUSG00000021700 Rab3c RAB3C, member RAS oncogene family protein_coding Mus_musculus

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