C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB3C, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000282878 RAB3C-001 ENSG00000152932 9606 + 5:58583040-58859394 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverOvaryPlacentaTestisENST00000282878
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Ovary Placenta Testis
ENST00000282878 0.956±0.00 0.441±0.00 13.385±3.49 0.497±0.20 0.610±0.00 0.027±0.02 0.114±0.04 0.115±0.07 0.044±0.00 0.112±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IDA:IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0006184 IDA:IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008021 IEA synaptic vesicle
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0017157 IEA regulation of exocytosis
GO:0019882 IMP antigen processing and presentation
GO:0031489 IPI myosin V binding
GO:0031982 IDA vesicle
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167824 Rab3c-201 protein_coding Mus_musculus 0 1201
ENSMUST00000110090 Rab3a-003 protein_coding Mus_musculus 0 363
ENSMUST00000110092 Rab3a-002 protein_coding Mus_musculus 0 363
ENSMUST00000110093 Rab3a-004 protein_coding Mus_musculus 0 361
ENSMUST00000034301 Rab3a-001 protein_coding Mus_musculus 0 361

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