C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CWC27 spliceosome-associated protein homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000153015 CWC27 9606 + 5:64768930-65018763 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000381070 CWC27-001 64768930-65018763 protein_coding
  ENST00000485990 CWC27-002 64773852-64789020 processed_transcript
  ENST00000506168 CWC27-004 64800245-64804907 retained_intron
  ENST00000508024 CWC27-005 64768946-64808562 protein_coding
  ENST00000545000 CWC27-003 64884156-65018591 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000381070ENST00000485990ENST00000506168ENST00000508024ENST00000545000
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000381070 5.275±0.00 4.294±0.00 0.254±0.00 3.892±2.67 1.277±0.81 6.007±4.76 6.781±0.00 3.494±2.67 1.827±0.41 1.807±1.53 2.147±1.87 6.434±3.85 7.214±4.97 16.428±4.15
ENST00000485990 N/A N/A 1.000±0.00 N/A 2.259±0.00 4.047±0.00 N/A 2.988±0.00 2.840±0.00 2.750±0.00 0.948±0.00 2.184±0.00 N/A N/A
ENST00000506168 N/A N/A N/A N/A 2.340±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508024 N/A N/A 0.206±0.00 1.736±0.54 0.744±0.00 0.980±0.00 0.614±0.00 N/A 1.195±0.00 0.551±0.00 N/A N/A N/A N/A
ENST00000545000 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.146±0.00 N/A 4.835±0.00 N/A 4.572±0.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FV CIL_0007FV_0002 CGP 5:64718144-65018763
CIL_0007FW CIL_0007FW_0002 CGP 5:64768930-65481920

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000398 IC mRNA splicing, via spliceosome
GO:0000413 IEA protein peptidyl-prolyl isomerization
GO:0003755 IEA peptidyl-prolyl cis-trans isomerase activity
GO:0005634 IEA nucleus
GO:0006457 IEA protein folding
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043727 cwc27 CWC27 spliceosome-associated protein homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000021715 Cwc27 CWC27 spliceosome-associated protein homolog (S. cerevisiae) protein_coding Mus_musculus

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