C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CWC27 spliceosome-associated protein homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381070 CWC27-001 ENSG00000153015 9606 + 5:64768930-65018763 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000381070
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000381070 5.275±0.00 4.294±0.00 0.254±0.00 3.892±2.67 1.277±0.81 6.007±4.76 6.781±0.00 3.494±2.67 1.827±0.41 1.807±1.53 2.147±1.87 6.434±3.85 7.214±4.97 16.428±4.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FV CIL_0007FV_0002 CGP 5:64718144-65018763
CIL_0007FW CIL_0007FW_0002 CGP 5:64768930-65481920

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 IC mRNA splicing, via spliceosome
GO:0000413 IEA protein peptidyl-prolyl isomerization
GO:0003755 IEA peptidyl-prolyl cis-trans isomerase activity
GO:0005634 IEA nucleus
GO:0006457 IEA protein folding
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022228 Cwc27-001 protein_coding Mus_musculus 0 1535
ENSMUST00000154165 Cwc27-002 protein_coding Mus_musculus 0 363

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