C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: AT hook containing transcription factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000153207 AHCTF1 9606 - 1:246839098-246931978 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326225 AHCTF1-002 246839098-246931424 protein_coding
  ENST00000366508 AHCTF1-001 246839098-246931363 protein_coding
  ENST00000470300 AHCTF1-003 246839098-246899480 processed_transcript
  ENST00000477526 AHCTF1-006 246861958-246864298 retained_intron
  ENST00000478568 AHCTF1-005 246916314-246931978 protein_coding
  ENST00000483900 AHCTF1-004 246849871-246877068 processed_transcript
  ENST00000498601 AHCTF1-007 246840962-246849849 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverLungMuscleOvaryPlacentaTestisENST00000326225ENST00000366508ENST00000470300ENST00000498601
Transcript ID Brain Breast Liver Lung Muscle Ovary Placenta Testis
ENST00000326225 3.028±0.00 1.397±1.07 0.243±0.00 1.603±0.00 1.101±0.00 1.065±0.25 1.450±0.76 7.846±0.00
ENST00000366508 N/A N/A N/A N/A N/A 0.978±0.26 N/A 14.974±8.35
ENST00000470300 0.360±0.00 0.568±0.00 0.165±0.00 N/A N/A N/A N/A N/A
ENST00000498601 N/A N/A N/A N/A N/A N/A 12.564±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000777 IDA condensed chromosome kinetochore
GO:0000785 IDA chromatin
GO:0000910 IMP cytokinesis
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005643 IDA nuclear pore
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0015031 IEA protein transport
GO:0016363 IEA nuclear matrix
GO:0031080 IDA nuclear pore outer ring
GO:0031965 IDA nuclear membrane
GO:0051028 IEA mRNA transport
GO:0051292 IMP nuclear pore complex assembly
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077530 ahctf1 AT hook containing transcription factor 1 protein_coding Danio_rerio
ENSMUSG00000026491 Ahctf1 AT hook containing transcription factor 1 protein_coding Mus_musculus

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