C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: AT hook containing transcription factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026491 Ahctf1 10090 - 1:179744894-179803680 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027768 Ahctf1-001 179744894-179803680 protein_coding
  ENSMUST00000125816 Ahctf1-007 179753699-179757989 nonsense_mediated_decay
  ENSMUST00000127250 Ahctf1-005 179760263-179765907 nonsense_mediated_decay
  ENSMUST00000140489 Ahctf1-002 179745337-179752409 protein_coding
  ENSMUST00000145968 Ahctf1-003 179768295-179770918 protein_coding
  ENSMUST00000147137 Ahctf1-004 179798847-179803606 retained_intron
  ENSMUST00000151734 Ahctf1-008 179746091-179753580 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027768ENSMUST00000151734
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027768 3.070±1.36 0.887±0.58 5.145±0.29 6.701±1.59 2.817±0.90 2.098±0.31 1.367±0.40 3.283±0.23 6.480±4.40 3.143±1.31 3.793±1.05 4.546±2.33 14.110±5.48 11.093±5.91
ENSMUST00000151734 N/A 1.585±0.00 4.672±0.00 3.858±0.00 N/A 1.337±0.15 N/A N/A 3.155±0.00 N/A 1.848±0.00 3.106±2.21 15.507±2.15 19.260±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000777 ISS condensed chromosome kinetochore
GO:0000785 ISS chromatin
GO:0000910 ISS cytokinesis
GO:0003677 IEA DNA binding
GO:0003700 IMP sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0005643 ISS nuclear pore
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0007067 IEA mitotic nuclear division
GO:0015031 IEA protein transport
GO:0016363 IDA nuclear matrix
GO:0030097 TAS hemopoiesis
GO:0031080 ISS nuclear pore outer ring
GO:0031965 IEA nuclear membrane
GO:0045893 TAS positive regulation of transcription, DNA-templated
GO:0051028 IEA mRNA transport
GO:0051292 ISS nuclear pore complex assembly
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077530 ahctf1 AT hook containing transcription factor 1 protein_coding Danio_rerio
ENSG00000153207 AHCTF1 AT hook containing transcription factor 1 protein_coding Homo_sapiens

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