C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000153317 ASAP1 9606 - 8:130052104-130443660 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357668 ASAP1-201 130052107-130443660 protein_coding
  ENST00000518721 ASAP1-001 130052842-130443660 protein_coding
  ENST00000518957 ASAP1-011 130195113-130214624 processed_transcript
  ENST00000519169 ASAP1-003 130179118-130236996 retained_intron
  ENST00000519483 ASAP1-015 130054741-130118522 protein_coding
  ENST00000520189 ASAP1-014 130076397-130112414 retained_intron
  ENST00000520342 ASAP1-010 130179335-130247042 protein_coding
  ENST00000520625 ASAP1-008 130360689-130401915 processed_transcript
  ENST00000520927 ASAP1-016 130180867-130427802 nonsense_mediated_decay
  ENST00000521057 ASAP1-013 130115577-130118779 retained_intron
  ENST00000521075 ASAP1-002 130052842-130401968 nonsense_mediated_decay
  ENST00000521426 ASAP1-007 130214645-130386877 protein_coding
  ENST00000524018 ASAP1-012 130152605-130160063 retained_intron
  ENST00000524124 ASAP1-004 130052104-130180862 protein_coding
  ENST00000524299 ASAP1-006 130214618-130443537 nonsense_mediated_decay
  ENST00000524367 ASAP1-009 130152764-130340937 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357668ENST00000518721ENST00000519169ENST00000519483ENST00000521075ENST00000524018ENST00000524124ENST00000524299ENST00000524367
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357668 2.278±0.00 N/A N/A N/A 1.714±0.68 N/A N/A 0.782±0.00 1.057±0.00 N/A N/A 3.907±1.71 1.203±0.00 3.344±0.00
ENST00000518721 2.689±0.00 N/A 0.715±0.00 N/A 1.849±0.00 1.459±0.00 1.179±0.34 1.135±0.00 0.255±0.00 1.295±0.00 0.764±0.00 4.049±0.00 N/A N/A
ENST00000519169 N/A N/A 2.152±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519483 N/A N/A 1.330±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.527±0.00 10.452±0.00
ENST00000521075 N/A N/A 0.529±0.00 N/A N/A N/A N/A N/A 1.815±0.00 N/A N/A N/A N/A N/A
ENST00000524018 N/A N/A N/A N/A N/A N/A 5.993±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000524124 5.222±0.00 4.963±0.00 N/A 2.769±1.24 2.146±0.00 N/A 0.359±0.00 1.263±0.00 N/A 1.553±0.00 0.294±0.00 2.732±0.86 1.371±0.00 4.577±0.00
ENST00000524299 N/A N/A N/A N/A N/A N/A 4.666±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000524367 N/A N/A N/A 9.038±0.00 7.174±0.00 4.399±0.00 1.356±0.00 N/A 3.728±0.00 8.318±0.00 1.368±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZM CIL_0004ZM_0001 CGP 8:129839593-130443660
CIL_0004ZP CIL_0004ZP_0001 CGP 8:130052104-131042426

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005546 IEA phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 IEA phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 IEA cytoplasm
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity
GO:0060271 IMP cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029463 asap1a ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a protein_coding Danio_rerio
ENSDARG00000039729 asap1b ArfGAP with SH3 domain, ankyrin repeat and PH domain 1b protein_coding Danio_rerio
ENSMUSG00000022377 Asap1 ArfGAP with SH3 domain, ankyrin repeat and PH domain1 protein_coding Mus_musculus

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