C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004ZM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153310-ENSG00000153317 CGP 9606 8:129839593-130443660
GeneTranscriptPositionBiotype
ENSG00000153310 (FAM49B)
family with sequence similarity 49, member B 		ENST00000401979 (FAM49B-005) 129841470-130016451 protein_coding
ENST00000517654 (FAM49B-009) 129841484-130016451 protein_coding
ENST00000517672 (FAM49B-026) 129871381-129970972 protein_coding
ENST00000517801 (FAM49B-027) 129850554-129862326 retained_intron
ENST00000518167 (FAM49B-015) 129871375-130016463 protein_coding
ENST00000518283 (FAM49B-016) 129862234-130016637 protein_coding
ENST00000518285 (FAM49B-014) 129970676-130016556 processed_transcript
ENST00000518344 (FAM49B-021) 129902961-129939771 retained_intron
ENST00000518879 (FAM49B-012) 129855611-130016665 processed_transcript
ENST00000519020 (FAM49B-024) 129862326-130016558 protein_coding
ENST00000519070 (FAM49B-022) 129871427-129939806 protein_coding
ENST00000519110 (FAM49B-008) 129841470-130016672 protein_coding
ENST00000519142 (FAM49B-018) 129855583-129970990 protein_coding
ENST00000519540 (FAM49B-004) 129841497-129939872 protein_coding
ENST00000519824 (FAM49B-001) 129839593-129939832 protein_coding
ENST00000520204 (FAM49B-025) 129862229-129939763 protein_coding
ENST00000520254 (FAM49B-023) 129862294-129939818 protein_coding
ENST00000520887 (FAM49B-028) 129842080-129847317 retained_intron
ENST00000521223 (FAM49B-020) 129855698-130016453 processed_transcript
ENST00000522250 (FAM49B-010) 129841484-129939694 protein_coding
ENST00000522361 (FAM49B-017) 129871433-130016451 protein_coding
ENST00000522702 (FAM49B-019) 129855688-130016637 processed_transcript
ENST00000522746 (FAM49B-002) 129841470-129939754 protein_coding
ENST00000522941 (FAM49B-003) 129841503-129939746 protein_coding
ENST00000523288 (FAM49B-007) 129841470-130016697 retained_intron
ENST00000523509 (FAM49B-006) 129841470-130016405 protein_coding
ENST00000523514 (FAM49B-013) 129970509-130016652 retained_intron
ENST00000523993 (FAM49B-011) 129862250-130017129 protein_coding
ENST00000615041 (FAM49B-201) 129846825-129871436 protein_coding
ENSG00000153317 (ASAP1)
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 		ENST00000357668 (ASAP1-201) 130052107-130443660 protein_coding
ENST00000518721 (ASAP1-001) 130052842-130443660 protein_coding
ENST00000518957 (ASAP1-011) 130195113-130214624 processed_transcript
ENST00000519169 (ASAP1-003) 130179118-130236996 retained_intron
ENST00000519483 (ASAP1-015) 130054741-130118522 protein_coding
ENST00000520189 (ASAP1-014) 130076397-130112414 retained_intron
ENST00000520342 (ASAP1-010) 130179335-130247042 protein_coding
ENST00000520625 (ASAP1-008) 130360689-130401915 processed_transcript
ENST00000520927 (ASAP1-016) 130180867-130427802 nonsense_mediated_decay
ENST00000521057 (ASAP1-013) 130115577-130118779 retained_intron
ENST00000521075 (ASAP1-002) 130052842-130401968 nonsense_mediated_decay
ENST00000521426 (ASAP1-007) 130214645-130386877 protein_coding
ENST00000524018 (ASAP1-012) 130152605-130160063 retained_intron
ENST00000524124 (ASAP1-004) 130052104-130180862 protein_coding
ENST00000524299 (ASAP1-006) 130214618-130443537 nonsense_mediated_decay
ENST00000524367 (ASAP1-009) 130152764-130340937 protein_coding
ENSG00000200075 (SNORA25)
Small nucleolar RNA SNORA25 		ENST00000363205 (SNORA25.1-203) 129868590-129868716 snoRNA
ENSG00000200304 (RNU6-1255P)
RNA, U6 small nuclear 1255, pseudogene 		ENST00000363434 (RNU6-1255P-201) 130069541-130069652 snRNA
ENSG00000212342 (SNORA12)
Small nucleolar RNA SNORA12 		ENST00000391040 (SNORA12.1-202) 130162972-130163127 snoRNA
ENSG00000243402 (RP11-473O4.1)
 ENST00000490340 (RP11-473O4.1-001) 129864478-129865052 processed_pseudogene
ENSG00000254263 (RP11-473O4.4)
 ENST00000521014 (RP11-473O4.4-001) 129890465-129901758 lincRNA
ENSG00000264653 (MIR5194)
microRNA 5194 		ENST00000582634 (MIR5194-201) 130008334-130008453 miRNA
CIL_0004ZM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022378-ENSMUSG00000022377 CGP 10090 15:63929097-64382919
GeneTranscriptPositionBiotype
ENSMUSG00000022378 (Fam49b)
family with sequence similarity 49, member B 		ENSMUST00000063838 (Fam49b-201) 63929097-64060448 protein_coding
ENSMUST00000164532 (Fam49b-202) 63930944-63997969 protein_coding
ENSMUSG00000093695 (Gm20717)
predicted gene 20717 		ENSMUST00000176762 (Gm20717-001) 64098317-64100886 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ZM_0001ENSG00000153310ENST00000401979ENST00000517654ENST00000517801ENST00000519020ENST00000519110ENST00000519540ENST00000519824ENST00000522250ENST00000522941ENST00000523288ENST00000523509ENST00000615041ENSG00000153317ENST00000357668ENST00000518721ENST00000519169ENST00000519483ENST00000521075ENST00000524018ENST00000524124ENST00000524299ENST00000524367ENSG00000200075ENST00000363205ENSG00000200304ENST00000363434ENSG00000212342ENST00000391040ENSG00000243402ENST00000490340ENSG00000254263ENST00000521014ENSG00000264653ENST00000582634CIL_0004ZM_0002ENSMUSG00000022378ENSMUST00000063838ENSMUST00000164532ENSMUSG00000093695ENSMUST00000176762
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000153310 ENST00000401979 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.603±0.00 N/A N/A N/A N/A
ENST00000517654 5.553±0.00 3.957±0.00 N/A N/A 5.709±0.00 1.971±0.00 2.538±0.00 3.280±0.00 2.369±0.00 7.964±0.00 N/A 8.800±5.54 8.820±3.18 N/A
ENST00000517672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517801 N/A N/A N/A N/A N/A N/A 1.396±0.00 1.744±0.00 N/A N/A N/A 15.820±0.00 N/A N/A
ENST00000518167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519020 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.265±0.00 N/A N/A N/A N/A
ENST00000519070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519110 N/A N/A N/A N/A 2.563±0.00 N/A N/A N/A N/A N/A N/A 3.018±0.00 N/A N/A
ENST00000519142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519540 2.411±0.00 N/A N/A N/A 3.957±1.67 2.243±0.00 2.449±0.00 0.777±0.00 1.241±0.00 N/A 1.504±0.00 9.158±6.93 7.017±0.84 9.491±3.44
ENST00000519824 N/A 1.772±0.00 N/A 13.114±8.12 2.487±0.00 0.604±0.00 1.669±0.00 N/A 0.763±0.37 N/A 1.116±0.00 4.068±2.89 2.082±0.00 1.980±0.48
ENST00000520204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522250 2.094±0.00 9.095±0.00 N/A N/A 4.204±0.00 1.906±0.00 N/A 7.544±0.00 3.116±0.00 4.981±0.00 N/A 4.514±0.00 6.574±0.49 4.370±0.00
ENST00000522361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.348±0.00 4.805±0.00 6.460±0.00
ENST00000523288 N/A N/A 1.229±0.00 N/A N/A N/A N/A N/A N/A 2.098±0.71 N/A 2.415±0.00 N/A N/A
ENST00000523509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.015±0.00 N/A N/A N/A
ENST00000523514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615041 N/A N/A 1.711±0.00 N/A N/A 5.080±0.00 N/A 1.986±0.00 3.793±0.00 N/A N/A N/A N/A N/A
ENSG00000153317 ENST00000357668 2.278±0.00 N/A N/A N/A 1.714±0.68 N/A N/A 0.782±0.00 1.057±0.00 N/A N/A 3.907±1.71 1.203±0.00 3.344±0.00
ENST00000518721 2.689±0.00 N/A 0.715±0.00 N/A 1.849±0.00 1.459±0.00 1.179±0.34 1.135±0.00 0.255±0.00 1.295±0.00 0.764±0.00 4.049±0.00 N/A N/A
ENST00000518957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519169 N/A N/A 2.152±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519483 N/A N/A 1.330±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.527±0.00 10.452±0.00
ENST00000520189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521075 N/A N/A 0.529±0.00 N/A N/A N/A N/A N/A 1.815±0.00 N/A N/A N/A N/A N/A
ENST00000521426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524018 N/A N/A N/A N/A N/A N/A 5.993±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000524124 5.222±0.00 4.963±0.00 N/A 2.769±1.24 2.146±0.00 N/A 0.359±0.00 1.263±0.00 N/A 1.553±0.00 0.294±0.00 2.732±0.86 1.371±0.00 4.577±0.00
ENST00000524299 N/A N/A N/A N/A N/A N/A 4.666±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000524367 N/A N/A N/A 9.038±0.00 7.174±0.00 4.399±0.00 1.356±0.00 N/A 3.728±0.00 8.318±0.00 1.368±0.00 N/A N/A N/A
ENSG00000200075 ENST00000363205 N/A N/A N/A 0.867±0.00 0.283±0.00 N/A N/A N/A N/A 0.685±0.00 N/A N/A N/A N/A
ENSG00000200304 ENST00000363434 N/A N/A 26.098±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.517±0.00 N/A N/A
ENSG00000212342 ENST00000391040 N/A N/A N/A N/A N/A N/A N/A N/A 3.351±0.00 N/A N/A N/A N/A 0.095±0.00
ENSG00000243402 ENST00000490340 N/A 0.026±0.00 0.298±0.00 0.163±0.00 1.193±1.06 0.324±0.00 0.323±0.30 0.137±0.00 0.598±0.00 1.044±1.02 0.022±0.00 0.566±0.69 N/A 0.071±0.00
ENSG00000254263 ENST00000521014 0.134±0.00 0.556±0.00 2.257±0.00 0.162±0.00 0.230±0.00 N/A 0.126±0.00 0.535±0.04 0.023±0.00 0.113±0.00 0.071±0.00 0.109±0.03 N/A 0.181±0.04
ENSG00000264653 ENST00000582634 N/A 0.321±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022378 ENSMUST00000063838 1.365±0.16 1.826±0.42 1.910±0.00 13.197±4.20 1.742±0.36 1.955±0.60 0.632±0.00 1.064±0.48 0.649±0.43 1.644±0.35 7.348±0.31 3.256±2.53 N/A 1.266±0.16
ENSMUST00000164532 5.266±0.58 2.663±0.38 17.077±0.08 17.208±4.97 9.933±3.15 3.130±0.38 2.921±0.65 3.487±0.66 11.752±10.09 5.700±1.44 2.571±0.00 10.553±4.14 28.792±7.64 7.319±2.87
ENSMUSG00000093695 ENSMUST00000176762 N/A 0.141±0.00 N/A 0.060±0.04 0.266±0.00 N/A N/A N/A 0.060±0.03 N/A 0.072±0.00 0.161±0.04 0.027±0.00 3.170±0.79

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