C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: craniofacial development protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000153774 CFDP1 9606 - 16:75293698-75433485 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000283882 CFDP1-001 75293710-75433485 protein_coding
  ENST00000562602 CFDP1-003 75293908-75305438 retained_intron
  ENST00000564286 CFDP1-006 75406572-75433470 processed_transcript
  ENST00000564793 CFDP1-010 75293906-75363035 processed_transcript
  ENST00000565646 CFDP1-005 75395135-75433473 processed_transcript
  ENST00000566254 CFDP1-007 75414633-75433391 protein_coding
  ENST00000566901 CFDP1-004 75394682-75433461 retained_intron
  ENST00000569341 CFDP1-008 75372291-75395136 nonsense_mediated_decay
  ENST00000570103 CFDP1-002 75293698-75306545 processed_transcript
  ENST00000570279 CFDP1-009 75391282-75395211 processed_transcript
  ENST00000612761 CFDP1-011 75372204-75395119 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000283882ENST00000564286ENST00000565646ENST00000566901ENST00000570103
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000283882 17.027±0.00 15.496±0.00 2.116±0.00 13.434±7.70 10.299±5.94 27.886±22.55 4.174±3.19 17.863±15.91 5.491±0.89 12.169±10.30 5.339±0.00 31.873±18.57 33.786±8.00 23.555±0.12
ENST00000564286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.677±0.00 39.228±0.00 45.046±0.00
ENST00000565646 N/A N/A 3.113±0.00 N/A N/A N/A N/A 3.039±0.00 N/A N/A N/A N/A N/A N/A
ENST00000566901 N/A N/A N/A N/A N/A N/A N/A 0.854±0.00 N/A N/A N/A N/A N/A N/A
ENST00000570103 N/A N/A 3.489±0.00 N/A N/A N/A N/A 4.882±0.00 N/A 4.832±0.00 N/A 18.196±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024P CIL_00024P_0001 CGP 16:75228187-75433485
CIL_0002KK CIL_0002KK_0001 CGP 16:75293698-75464706

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0007155 IEA cell adhesion
GO:0007275 IEA multicellular organismal development
GO:0008150 ND biological_process
GO:0008360 IEA regulation of cell shape
GO:0042127 IEA regulation of cell proliferation
GO:2000270 IEA negative regulation of fibroblast apoptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000095086 rltpr RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing protein_coding Danio_rerio
ENSMUSG00000031954 Cfdp1 craniofacial development protein 1 protein_coding Mus_musculus

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