C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin-repeat and fibronectin type III domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000153930 ANKFN1 9606 + 17:56110958-56511659 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318698 ANKFN1-001 56153475-56482646 protein_coding
  ENST00000566473 ANKFN1-002 56153510-56511659 protein_coding
  ENST00000572312 ANKFN1-008 56323223-56326333 processed_transcript
  ENST00000572321 ANKFN1-009 56456947-56463906 processed_transcript
  ENST00000572945 ANKFN1-006 56174175-56353895 protein_coding
  ENST00000573365 ANKFN1-007 56227917-56258359 processed_transcript
  ENST00000574292 ANKFN1-005 56153471-56227957 processed_transcript
  ENST00000575594 ANKFN1-004 56110958-56228550 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000318698ENST00000566473ENST00000572321ENST00000572945ENST00000573365ENST00000575594
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000318698 N/A N/A 0.052±0.00 0.116±0.00 N/A 0.131±0.00 N/A 0.045±0.00 0.361±0.00 0.328±0.00 N/A 0.489±0.07 0.245±0.00
ENST00000566473 0.029±0.00 N/A N/A 0.322±0.08 0.012±0.00 0.067±0.00 N/A N/A N/A 0.319±0.25 0.018±0.00 0.543±0.17 N/A
ENST00000572321 N/A 0.163±0.00 N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572945 0.108±0.00 N/A 0.026±0.00 N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573365 N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A
ENST00000575594 N/A N/A N/A N/A N/A N/A 0.300±0.00 0.068±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RI CIL_0007RI_0001 VISTA 17:55829358-56431065
CIL_0004WZ CIL_0004WZ_0003 CGP 17:56110958-56595590

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060941 ANKFN1 (1 of 2) ankyrin-repeat and fibronectin type III domain containing 1 protein_coding Danio_rerio
ENSDARG00000074494 AL935268.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000047773 Ankfn1 ankyrin-repeat and fibronectin type III domain containing 1 protein_coding Mus_musculus

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