C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007RI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs923 VISTA 9606 17:55829358-56431065
GeneTranscriptPositionBiotype
ENSG00000141179 (PCTP)
phosphatidylcholine transfer protein 		ENST00000268896 (PCTP-001) 55750979-55777374 protein_coding
ENST00000325214 (PCTP-004) 55751400-55777374 protein_coding
ENST00000417982 (PCTP-003) 55751105-55777373 nonsense_mediated_decay
ENST00000571489 (PCTP-005) 55768847-55777387 retained_intron
ENST00000572536 (PCTP-010) 55773736-55823090 protein_coding
ENST00000573500 (PCTP-008) 55751094-55823090 protein_coding
ENST00000576183 (PCTP-006) 55751061-55777368 protein_coding
ENST00000576221 (PCTP-009) 55771177-55842830 processed_transcript
ENSG00000153930 (ANKFN1)
ankyrin-repeat and fibronectin type III domain containing 1 		ENST00000318698 (ANKFN1-001) 56153475-56482646 protein_coding
ENST00000566473 (ANKFN1-002) 56153510-56511659 protein_coding
ENST00000572312 (ANKFN1-008) 56323223-56326333 processed_transcript
ENST00000572321 (ANKFN1-009) 56456947-56463906 processed_transcript
ENST00000572945 (ANKFN1-006) 56174175-56353895 protein_coding
ENST00000573365 (ANKFN1-007) 56227917-56258359 processed_transcript
ENST00000574292 (ANKFN1-005) 56153471-56227957 processed_transcript
ENST00000575594 (ANKFN1-004) 56110958-56228550 retained_intron
ENSG00000264277 (AC011073.1)
 ENST00000579668 (AC011073.1-201) 56054787-56054886 miRNA
CIL_0007RI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs923 VISTA 10090 11:89417798-90019510
GeneTranscriptPositionBiotype
ENSMUSG00000020553 (Pctp)
phosphatidylcholine transfer protein 		ENSMUST00000020864 (Pctp-001) 89982665-90002894 protein_coding
ENSMUSG00000047490 (4932411E22Rik)
RIKEN cDNA 4932411E22 gene 		ENSMUST00000050983 (4932411E22Rik-001) 89390223-89418948 protein_coding
ENSMUSG00000047773 (Ankfn1)
ankyrin-repeat and fibronectin type III domain containing 1 		ENSMUST00000128717 (Ankfn1-001) 89420987-89639631 protein_coding
ENSMUST00000169201 (Ankfn1-201) 89421086-89538556 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007RI_0001ENSG00000141179ENST00000268896ENST00000325214ENST00000417982ENST00000571489ENST00000572536ENST00000573500ENST00000576183ENST00000576221ENSG00000153930ENST00000318698ENST00000566473ENST00000572312ENST00000572321ENST00000572945ENST00000573365ENST00000574292ENST00000575594ENSG00000264277ENST00000579668CIL_0007RI_0002ENSMUSG00000020553ENSMUST00000020864ENSMUSG00000047490ENSMUST00000050983ENSMUSG00000047773ENSMUST00000128717ENSMUST00000169201
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007RI_0001ENSG00000141179ENST00000268896ENST00000325214ENST00000417982ENST00000571489ENST00000573500ENST00000576183ENST00000576221ENSG00000153930ENST00000318698ENST00000566473ENST00000572321ENST00000572945ENST00000573365ENST00000575594ENSG00000264277ENST00000579668CIL_0007RI_0002ENSMUSG00000020553ENSMUST00000020864ENSMUSG00000047490ENSMUST00000050983ENSMUSG00000047773ENSMUST00000128717ENSMUST00000169201
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141179 ENST00000268896 7.773±0.00 6.924±0.00 3.239±0.00 0.910±0.00 4.196±2.39 7.214±2.87 2.200±1.40 16.686±0.39 14.399±12.83 1.453±0.76 1.784±0.19 6.577±2.39 19.064±5.18 8.662±1.45
ENST00000325214 2.489±0.00 N/A N/A 0.523±0.00 N/A N/A 0.384±0.00 N/A 2.080±0.00 2.333±1.31 N/A 1.409±0.00 4.824±0.00 3.565±0.00
ENST00000417982 N/A N/A N/A 0.371±0.00 N/A N/A N/A N/A N/A 0.607±0.00 N/A N/A N/A N/A
ENST00000571489 N/A N/A N/A N/A 0.269±0.00 N/A N/A N/A N/A N/A N/A 0.502±0.00 N/A N/A
ENST00000572536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573500 N/A N/A N/A 0.741±0.06 0.685±0.00 1.961±0.00 1.701±0.00 3.651±0.00 N/A 1.056±0.00 1.076±0.00 11.816±0.00 22.501±0.00 13.633±0.00
ENST00000576183 N/A N/A N/A 0.428±0.00 N/A 0.587±0.00 0.209±0.00 N/A N/A 0.833±0.06 0.574±0.14 0.950±0.24 N/A 1.765±0.00
ENST00000576221 N/A N/A N/A 1.723±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153930 ENST00000318698 N/A N/A 0.052±0.00 0.116±0.00 N/A 0.131±0.00 N/A 0.045±0.00 0.361±0.00 0.328±0.00 N/A N/A 0.489±0.07 0.245±0.00
ENST00000566473 0.029±0.00 N/A N/A 0.322±0.08 0.012±0.00 0.067±0.00 N/A N/A N/A 0.319±0.25 N/A 0.018±0.00 0.543±0.17 N/A
ENST00000572312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572321 N/A 0.163±0.00 N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572945 0.108±0.00 N/A 0.026±0.00 N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573365 N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000574292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575594 N/A N/A N/A N/A N/A N/A 0.300±0.00 0.068±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000264277 ENST00000579668 N/A 1.264±0.00 N/A 0.271±0.00 1.850±0.00 N/A 0.989±0.00 0.514±0.00 N/A 0.822±0.00 N/A 82.914±0.00 N/A 0.232±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020553 ENSMUST00000020864 1.144±0.24 1.556±0.26 1.955±0.98 0.245±0.09 1.543±0.47 2.499±0.35 1.025±0.10 5.292±1.91 7.253±4.75 1.571±0.87 1.334±0.12 1.568±0.80 2.225±0.70 2.249±1.03
ENSMUSG00000047490 ENSMUST00000050983 0.212±0.26 0.135±0.06 N/A 0.350±0.09 0.167±0.05 0.029±0.02 0.034±0.01 0.046±0.02 0.003±0.00 0.956±0.02 0.048±0.01 1.163±0.45 0.044±0.04 2.353±1.17
ENSMUSG00000047773 ENSMUST00000128717 0.252±0.11 0.037±0.00 N/A 0.236±0.00 N/A N/A N/A 0.038±0.00 N/A 0.307±0.11 N/A 0.485±0.25 0.037±0.03 N/A
ENSMUST00000169201 0.246±0.00 0.052±0.02 N/A 0.755±0.37 0.087±0.03 N/A 0.026±0.00 0.026±0.01 0.019±0.02 0.186±0.01 0.031±0.01 0.650±0.20 0.028±0.02 1.233±0.00

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