Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	ATP-binding cassette, sub-family A (ABC1), member 10
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000154263	ABCA10	9606	-	17:69147214-69244846	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000269081		ABCA10-001	69148007-69244846	protein_coding
	ENST00000518929		ABCA10-004	69148592-69225442	nonsense_mediated_decay
	ENST00000519732		ABCA10-006	69148499-69175781	processed_transcript
	ENST00000521526		ABCA10-008	69222678-69228700	processed_transcript
	ENST00000521538		ABCA10-010	69147219-69150063	protein_coding
	ENST00000522406		ABCA10-003	69148008-69228655	nonsense_mediated_decay
	ENST00000522787		ABCA10-011	69147214-69150062	protein_coding
	ENST00000523419		ABCA10-005	69148592-69225442	nonsense_mediated_decay
	ENST00000523512		ABCA10-002	69214704-69228677	nonsense_mediated_decay
	ENST00000524231		ABCA10-007	69148180-69150452	retained_intron
	ENST00000524273		ABCA10-009	69214772-69222613	nonsense_mediated_decay
	ENST00000588514		ABCA10-014	69148745-69149323	retained_intron

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Breast	Colon	Heart	Liver	Lung	Ovary
ENST00000269081	N/A	N/A	N/A	N/A	N/A	0.657±0.00	N/A	1.576±0.00	N/A
ENST00000518929	N/A	N/A	N/A	N/A	N/A	0.997±0.00	3.934±0.00	N/A	2.974±0.00
ENST00000522406	1.111±0.00	0.669±0.00	1.090±0.00	N/A	0.644±0.00	0.573±0.00	N/A	0.476±0.00	1.032±0.00
ENST00000523419	N/A	N/A	N/A	2.139±0.00	N/A	N/A	N/A	N/A	2.645±0.00

Conserved Regions
Gene is not located within a conserved region.

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005524	IEA	ATP binding
GO:0006200	IEA	ATP catabolic process
GO:0006810	IEA	transport
GO:0016021	IEA	integral component of membrane
GO:0016887	IEA	ATPase activity

No Homologs available.
Homologs

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