C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family A (ABC1), member 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522406 ABCA10-003 ENSG00000154263 9606 - 17:69148008-69228655 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonHeartLungOvaryENST00000522406
Transcript ID Adipose Adrenal Bladder Colon Heart Lung Ovary
ENST00000522406 1.111±0.00 0.669±0.00 1.090±0.00 0.644±0.00 0.573±0.00 0.476±0.00 1.032±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106664 Abca8a-202 protein_coding Mus_musculus 0 521
ENSMUST00000046223 Abca8a-201 protein_coding Mus_musculus 0 521
ENSMUST00000100287 Abca8a-001 protein_coding Mus_musculus 0 521
ENSMUST00000044003 Abca6-001 protein_coding Mus_musculus 0 298
ENSMUST00000044850 Abca9-001 protein_coding Mus_musculus 5e-28 132

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