C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LON peptidase N-terminal domain and ring finger 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154359 LONRF1 9606 - 8:12721894-12756073 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000398246 LONRF1-001 12721894-12755490 protein_coding
  ENST00000524526 LONRF1-004 12722981-12737095 protein_coding
  ENST00000525024 LONRF1-008 12722944-12729387 protein_coding
  ENST00000526610 LONRF1-007 12729174-12735626 retained_intron
  ENST00000526680 LONRF1-002 12721906-12743243 nonsense_mediated_decay
  ENST00000527055 LONRF1-009 12722758-12725998 retained_intron
  ENST00000530693 LONRF1-005 12738029-12756073 processed_transcript
  ENST00000533751 LONRF1-003 12722971-12754342 protein_coding
  ENST00000534446 LONRF1-006 12736699-12738766 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000398246ENST00000524526ENST00000525024ENST00000526680ENST00000533751
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000398246 3.390±0.00 N/A 0.811±0.00 1.788±0.43 1.622±0.00 1.737±0.47 1.033±0.00 0.518±0.00 1.205±0.95 2.098±1.19 1.450±0.75 2.721±1.77 1.559±0.35 5.228±1.41
ENST00000524526 2.547±0.00 N/A N/A 2.775±0.70 N/A N/A N/A 1.638±0.00 N/A N/A 1.304±0.00 2.065±0.00 2.850±0.00 13.929±0.00
ENST00000525024 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.955±0.00 N/A N/A 1.316±0.00 N/A
ENST00000526680 N/A 1.893±0.00 N/A 0.720±0.00 0.703±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533751 N/A N/A N/A N/A N/A N/A 0.411±0.00 N/A 1.022±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VH CIL_0003VH_0001 CGP 8:12721894-13031503

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004176 IEA ATP-dependent peptidase activity
GO:0005515 IEA protein binding
GO:0006200 IEA ATP catabolic process
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078567 lonrf1l LON peptidase N-terminal domain and ring finger 1, like protein_coding Danio_rerio
ENSMUSG00000039633 Lonrf1 LON peptidase N-terminal domain and ring finger 1 protein_coding Mus_musculus

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