C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: guanylate binding protein 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154451 GBP5 9606 - 1:89258950-89272804 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370459 GBP5-001 89260582-89270863 protein_coding
  ENST00000443807 GBP5-002 89262698-89272804 protein_coding
  ENST00000471171 GBP5-004 89260582-89262274 processed_transcript
  ENST00000481145 GBP5-003 89258950-89266579 retained_intron
  ENST00000490568 GBP5-005 89260586-89268856 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370459ENST00000443807ENST00000481145
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370459 0.326±0.00 3.948±0.00 0.036±0.02 1.252±0.78 0.392±0.31 0.151±0.00 0.604±0.54 0.577±0.39 4.805±0.00 0.019±0.00 1.015±0.24 0.681±0.27 0.882±0.13
ENST00000443807 N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A 1.006±0.00 N/A 0.328±0.00 N/A N/A
ENST00000481145 N/A 1.201±0.00 N/A 0.363±0.20 0.235±0.00 0.032±0.00 0.056±0.00 0.149±0.00 0.817±0.00 0.015±0.00 0.159±0.09 0.164±0.10 0.300±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000033 CIL_000033_0007 CGP 1:89181148-89272804
CIL_000033 CIL_000033_0005 CGP 1:89258950-89386461

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0006184 IEA GTP catabolic process
GO:0016020 IDA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0042802 IPI identical protein binding
GO:0071346 IEA cellular response to interferon-gamma

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005627 CABZ01068209.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000034063 CABZ01068208.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000038668 gbp1 guanylate binding protein 1 protein_coding Danio_rerio
ENSDARG00000038669 gbp2 guanylate binding protein 2 protein_coding Danio_rerio
ENSDARG00000067663 si:ch211-209n20.1 si:ch211-209n20.1 protein_coding Danio_rerio
ENSDARG00000068857 gbp4 guanylate binding protein 4 protein_coding Danio_rerio
ENSDARG00000074988 si:ch211-209n20.1 si:ch211-209n20.1 protein_coding Danio_rerio
ENSMUSG00000040264 Gbp5 guanylate binding protein 5 protein_coding Mus_musculus

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