C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: guanylate binding protein 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040264 Gbp5 10090 + 3:142496934-142619179 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029936 Gbp5-001 142594847-142619179 protein_coding
  ENSMUST00000090127 Gbp5-201 142496934-142522344 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029936ENSMUST00000090127
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029936 0.076±0.03 0.062±0.02 0.963±0.00 0.066±0.00 0.428±0.12 0.376±0.17 0.025±0.00 0.085±0.06 0.261±0.27 0.093±0.04 0.013±0.00 0.137±0.08 0.027±0.02 0.024±0.01
ENSMUST00000090127 2.640±0.91 0.625±0.17 8.248±1.61 0.234±0.26 2.171±0.33 0.522±0.05 0.993±0.06 0.749±0.33 0.330±0.21 1.422±0.17 1.189±0.13 0.895±0.51 0.303±0.32 0.197±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091X CIL_00091X_0002 VISTA 3:141937411-142539503
CIL_000033 CIL_000033_000D CGP 3:142496934-142619179

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0016020 IEA membrane
GO:0019002 IDA GMP binding
GO:0020005 IDA symbiont-containing vacuole membrane
GO:0031410 IDA cytoplasmic vesicle
GO:0035458 IDA cellular response to interferon-beta
GO:0042802 IEA identical protein binding
GO:0042832 IDA defense response to protozoan
GO:0044406 IDA adhesion of symbiont to host
GO:0050830 IDA defense response to Gram-positive bacterium
GO:0071346 IDA cellular response to interferon-gamma

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005627 CABZ01068209.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000034063 CABZ01068208.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000038668 gbp1 guanylate binding protein 1 protein_coding Danio_rerio
ENSDARG00000038669 gbp2 guanylate binding protein 2 protein_coding Danio_rerio
ENSDARG00000067663 si:ch211-209n20.1 si:ch211-209n20.1 protein_coding Danio_rerio
ENSDARG00000068857 gbp4 guanylate binding protein 4 protein_coding Danio_rerio
ENSDARG00000074988 si:ch211-209n20.1 si:ch211-209n20.1 protein_coding Danio_rerio
ENSG00000154451 GBP5 guanylate binding protein 5 protein_coding Homo_sapiens

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