C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sorbin and SH3 domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154556 SORBS2 9606 - 4:185585444-185956652 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000284776 SORBS2-001 185585444-185956368 protein_coding
  ENST00000319454 SORBS2-010 185593884-185775288 protein_coding
  ENST00000319471 SORBS2-008 185587305-185811071 protein_coding
  ENST00000355634 SORBS2-003 185587322-185956652 protein_coding
  ENST00000393523 SORBS2-018 185662170-185812209 protein_coding
  ENST00000393528 SORBS2-006 185587323-185812221 protein_coding
  ENST00000414724 SORBS2-031 185662108-185775380 protein_coding
  ENST00000415274 SORBS2-015 185662216-185956409 protein_coding
  ENST00000418609 SORBS2-201 185585444-185656969 protein_coding
  ENST00000419063 SORBS2-039 185662159-185811979 protein_coding
  ENST00000420158 SORBS2-024 185662177-185811012 protein_coding
  ENST00000421420 SORBS2-044 185677348-185690599 protein_coding
  ENST00000421639 SORBS2-022 185662204-185811104 protein_coding
  ENST00000425679 SORBS2-037 185657534-185775451 protein_coding
  ENST00000428330 SORBS2-043 185666114-185811757 protein_coding
  ENST00000429056 SORBS2-020 185678424-185811757 protein_coding
  ENST00000430503 SORBS2-034 185657472-185775276 protein_coding
  ENST00000431902 SORBS2-048 185662215-185956348 protein_coding
  ENST00000432655 SORBS2-041 185662235-185956334 protein_coding
  ENST00000435480 SORBS2-046 185662216-185775441 protein_coding
  ENST00000437304 SORBS2-009 185587305-185775912 protein_coding
  ENST00000438278 SORBS2-051 185618602-185657520 protein_coding
  ENST00000439049 SORBS2-025 185657536-185810894 protein_coding
  ENST00000439914 SORBS2-021 185652717-185811752 protein_coding
  ENST00000444771 SORBS2-027 185657424-185775522 protein_coding
  ENST00000444781 SORBS2-047 185657580-185956334 protein_coding
  ENST00000445115 SORBS2-029 185657487-185775413 protein_coding
  ENST00000445343 SORBS2-035 185652695-185761590 protein_coding
  ENST00000445625 SORBS2-061 185626832-185652688 protein_coding
  ENST00000448662 SORBS2-202 185585444-185810894 protein_coding
  ENST00000449407 SORBS2-007 185587306-185812238 protein_coding
  ENST00000450341 SORBS2-033 185657472-185775289 protein_coding
  ENST00000451701 SORBS2-042 185666039-185775414 protein_coding
  ENST00000451958 SORBS2-038 185657570-185811749 protein_coding
  ENST00000451974 SORBS2-062 185614888-185649606 protein_coding
  ENST00000452351 SORBS2-036 185678423-185740330 protein_coding
  ENST00000456060 SORBS2-017 185684811-185813124 protein_coding
  ENST00000456596 SORBS2-030 185657524-185775380 protein_coding
  ENST00000457247 SORBS2-028 185657513-185775441 protein_coding
  ENST00000457934 SORBS2-040 185662210-185775451 protein_coding
  ENST00000462661 SORBS2-004 185770979-185812239 retained_intron
  ENST00000463104 SORBS2-045 185678430-185811852 processed_transcript
  ENST00000464819 SORBS2-023 185677558-185811104 processed_transcript
  ENST00000464975 SORBS2-026 185677500-185775833 processed_transcript
  ENST00000466289 SORBS2-057 185646174-185656734 retained_intron
  ENST00000469627 SORBS2-002 185773945-185956348 retained_intron
  ENST00000470685 SORBS2-005 185646617-185812238 retained_intron
  ENST00000476311 SORBS2-058 185645983-185656724 processed_transcript
  ENST00000476878 SORBS2-032 185757042-185956368 processed_transcript
  ENST00000478249 SORBS2-049 185677565-185811960 processed_transcript
  ENST00000478461 SORBS2-064 185587426-185589835 retained_intron
  ENST00000480146 SORBS2-063 185614626-185615222 retained_intron
  ENST00000485380 SORBS2-060 185646448-185656680 retained_intron
  ENST00000487184 SORBS2-014 185624242-185626909 processed_transcript
  ENST00000487836 SORBS2-054 185626851-185656746 processed_transcript
  ENST00000488562 SORBS2-016 185775281-185933370 processed_transcript
  ENST00000490562 SORBS2-056 185630549-185656740 processed_transcript
  ENST00000490779 SORBS2-050 185645578-185657546 processed_transcript
  ENST00000492104 SORBS2-053 185638895-185656967 processed_transcript
  ENST00000492810 SORBS2-055 185645838-185656743 processed_transcript
  ENST00000493709 SORBS2-019 185662206-185812049 processed_transcript
  ENST00000494140 SORBS2-052 185646667-185657301 processed_transcript
  ENST00000495932 SORBS2-059 185626924-185656684 processed_transcript
  ENST00000498125 SORBS2-011 185607016-185656969 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLungMuscleOvaryPlacentaTestisENST00000284776ENST00000319454ENST00000437304ENST00000448662ENST00000449407ENST00000450341ENST00000451958ENST00000451974ENST00000462661ENST00000490779
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000284776 N/A 1.466±0.00 4.498±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000319454 N/A 4.718±0.00 N/A N/A N/A N/A N/A N/A 1.418±0.00 9.275±0.00 0.651±0.00
ENST00000437304 N/A 2.351±0.00 N/A N/A 23.136±0.00 8.738±0.00 N/A N/A N/A N/A N/A
ENST00000448662 N/A N/A N/A 2.546±0.00 15.113±0.00 12.464±0.00 N/A N/A N/A N/A N/A
ENST00000449407 N/A N/A N/A N/A N/A N/A N/A N/A 3.314±0.00 N/A 0.616±0.00
ENST00000450341 N/A N/A N/A N/A N/A N/A N/A 1.239±0.00 N/A N/A N/A
ENST00000451958 N/A N/A N/A N/A N/A N/A N/A 1.359±0.00 N/A N/A N/A
ENST00000451974 N/A N/A N/A N/A N/A N/A N/A 0.670±0.00 N/A N/A N/A
ENST00000462661 N/A 1.925±0.00 N/A N/A 8.970±0.00 7.371±0.00 1.475±0.00 N/A 1.065±0.66 N/A N/A
ENST00000490779 5.874±0.00 N/A N/A N/A N/A N/A N/A 5.552±0.00 N/A N/A 9.406±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H0 CIL_0000H0_0003 CGP 4:185500660-185956652
CIL_0000H1 CIL_0000H1_0002 CGP 4:185585444-186088069

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IPI:IEA protein binding
GO:0005634 NAS nucleus
GO:0005886 IEA plasma membrane
GO:0007015 IEA actin filament organization
GO:0007155 IEA cell adhesion
GO:0008093 TAS cytoskeletal adaptor activity
GO:0008150 ND biological_process
GO:0008307 TAS structural constituent of muscle
GO:0015629 TAS actin cytoskeleton
GO:0016477 IEA cell migration
GO:0019904 IEA protein domain specific binding
GO:0030018 NAS Z disc
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003046 sorbs2a sorbin and SH3 domain containing 2a protein_coding Danio_rerio
ENSDARG00000061603 sorbs2b sorbin and SH3 domain containing 2b protein_coding Danio_rerio
ENSMUSG00000031626 Sorbs2 sorbin and SH3 domain containing 2 protein_coding Mus_musculus

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