C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sorbin and SH3 domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031626 Sorbs2 10090 + 8:45507788-45827906 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067065 Sorbs2-201 45507788-45827906 protein_coding
  ENSMUST00000067107 Sorbs2-202 45507788-45827906 protein_coding
  ENSMUST00000124544 Sorbs2-003 45507794-45778351 retained_intron
  ENSMUST00000125295 Sorbs2-012 45763108-45827904 protein_coding
  ENSMUST00000126067 Sorbs2-020 45658709-45746589 protein_coding
  ENSMUST00000127395 Sorbs2-009 45628185-45649302 processed_transcript
  ENSMUST00000130011 Sorbs2-011 45661996-45827592 protein_coding
  ENSMUST00000130850 Sorbs2-019 45628201-45746632 protein_coding
  ENSMUST00000132139 Sorbs2-001 45658804-45827905 protein_coding
  ENSMUST00000132730 Sorbs2-021 45772354-45775893 retained_intron
  ENSMUST00000132767 Sorbs2-023 45763846-45799741 processed_transcript
  ENSMUST00000133864 Sorbs2-018 45658696-45745666 retained_intron
  ENSMUST00000134321 Sorbs2-026 45627745-45745807 protein_coding
  ENSMUST00000134675 Sorbs2-005 45658670-45776882 protein_coding
  ENSMUST00000135336 Sorbs2-004 45627803-45827873 protein_coding
  ENSMUST00000136119 Sorbs2-008 45658784-45742419 retained_intron
  ENSMUST00000136344 Sorbs2-024 45803208-45803919 retained_intron
  ENSMUST00000138049 Sorbs2-002 45507798-45795412 protein_coding
  ENSMUST00000139103 Sorbs2-015 45688337-45759101 protein_coding
  ENSMUST00000139869 Sorbs2-010 45658676-45827903 protein_coding
  ENSMUST00000140088 Sorbs2-022 45769839-45792885 protein_coding
  ENSMUST00000141039 Sorbs2-006 45507818-45776882 protein_coding
  ENSMUST00000143820 Sorbs2-017 45658804-45772653 protein_coding
  ENSMUST00000145458 Sorbs2-013 45627972-45745829 protein_coding
  ENSMUST00000146627 Sorbs2-028 45775669-45795086 protein_coding
  ENSMUST00000149752 Sorbs2-014 45661993-45759092 protein_coding
  ENSMUST00000150102 Sorbs2-016 45688333-45759141 protein_coding
  ENSMUST00000153798 Sorbs2-007 45658292-45821141 protein_coding
  ENSMUST00000155858 Sorbs2-027 45770555-45792853 protein_coding
  ENSMUST00000156549 Sorbs2-025 45805804-45807367 processed_transcript
  ENSMUST00000171337 Sorbs2-203 45507788-45827906 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067107ENSMUST00000125295ENSMUST00000130011ENSMUST00000132139ENSMUST00000132767ENSMUST00000135336ENSMUST00000139869ENSMUST00000143820
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067107 N/A N/A N/A 9.688±2.54 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125295 N/A N/A N/A 9.371±1.22 N/A N/A N/A N/A N/A N/A 1.694±0.00 N/A N/A N/A
ENSMUST00000130011 2.549±1.09 4.298±0.68 8.579±0.34 N/A 0.994±0.30 2.633±0.45 14.043±0.00 1.426±0.25 N/A N/A 4.979±0.12 11.270±6.05 0.922±0.38 0.925±0.10
ENSMUST00000132139 1.562±0.77 9.339±1.29 11.081±0.27 8.618±0.46 0.973±0.17 5.210±1.01 24.323±2.78 1.197±0.26 3.592±3.03 0.862±0.31 9.228±0.27 10.939±4.06 0.705±0.16 0.540±0.36
ENSMUST00000132767 N/A N/A N/A N/A N/A 8.649±1.28 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135336 N/A N/A N/A N/A 0.299±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139869 2.041±0.99 6.358±1.04 14.291±0.04 N/A 0.864±0.18 3.206±0.69 11.184±0.19 1.334±0.41 0.964±0.54 0.973±0.15 4.159±0.95 8.300±2.75 0.682±0.32 0.924±0.26
ENSMUST00000143820 6.949±3.14 35.464±3.23 N/A N/A 4.531±1.00 10.920±2.60 N/A 6.547±0.17 15.353±5.20 5.597±0.00 N/A 51.139±10.36 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0007015 IEA actin filament organization
GO:0007155 IEA cell adhesion
GO:0016477 IEA cell migration
GO:0019904 IPI protein domain specific binding
GO:0030054 IEA cell junction
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003046 sorbs2a sorbin and SH3 domain containing 2a protein_coding Danio_rerio
ENSDARG00000061603 sorbs2b sorbin and SH3 domain containing 2b protein_coding Danio_rerio
ENSG00000154556 SORBS2 sorbin and SH3 domain containing 2 protein_coding Homo_sapiens

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