C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adenomatosis polyposis coli down-regulated 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154856 APCDD1 9606 + 18:10454628-10489948 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355285 APCDD1-001 10454628-10489948 protein_coding
  ENST00000423585 APCDD1-002 10454836-10487896 nonsense_mediated_decay
  ENST00000578882 APCDD1-004 10454982-10487663 protein_coding
  ENST00000579685 APCDD1-005 10472007-10487814 nonsense_mediated_decay
  ENST00000582723 APCDD1-003 10454884-10485503 nonsense_mediated_decay
  ENST00000584596 APCDD1-006 10471836-10477878 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355285ENST00000423585ENST00000578882ENST00000579685ENST00000582723ENST00000584596
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355285 10.435±0.00 1.057±0.00 N/A 4.727±3.31 7.776±7.38 2.585±1.34 2.121±1.52 1.932±1.82 1.445±0.93 2.632±2.28 0.991±0.10 5.329±3.59 7.206±3.42 3.209±2.11
ENST00000423585 21.829±0.00 3.801±0.00 N/A 4.246±0.00 4.081±0.00 5.542±1.98 3.345±0.00 7.766±0.00 6.868±0.00 N/A N/A N/A N/A 7.299±0.00
ENST00000578882 N/A N/A 1.045±0.00 3.885±0.00 2.309±0.00 N/A N/A N/A N/A 2.078±0.00 N/A N/A N/A N/A
ENST00000579685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.213±0.00 N/A N/A N/A
ENST00000582723 N/A N/A N/A 9.386±5.96 N/A N/A 8.237±0.00 5.702±0.00 N/A N/A 2.356±0.00 15.817±9.78 29.219±0.00 6.620±0.00
ENST00000584596 N/A N/A N/A N/A N/A N/A 0.303±0.00 N/A N/A 0.403±0.00 0.393±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021J CIL_00021J_0001 CGP 18:10454628-10552761

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001942 IMP hair follicle development
GO:0005887 IDA integral component of plasma membrane
GO:0016055 IEA Wnt signaling pathway
GO:0017147 IDA Wnt-protein binding
GO:0030178 IDA negative regulation of Wnt signaling pathway
GO:0043615 IEA astrocyte cell migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089509 APCDD1 adenomatosis polyposis coli down-regulated 1 protein_coding Danio_rerio
ENSMUSG00000071847 Apcdd1 adenomatosis polyposis coli down-regulated 1 protein_coding Mus_musculus

Loading