C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenomatosis polyposis coli down-regulated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355285 APCDD1-001 ENSG00000154856 9606 + 18:10454628-10489948 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355285
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355285 10.435±0.00 1.057±0.00 4.727±3.31 7.776±7.38 2.585±1.34 2.121±1.52 1.932±1.82 1.445±0.93 2.632±2.28 0.991±0.10 5.329±3.59 7.206±3.42 3.209±2.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021J CIL_00021J_0001 CGP 18:10454628-10552761

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001942 IMP hair follicle development
GO:0005887 IDA integral component of plasma membrane
GO:0016055 IEA Wnt signaling pathway
GO:0017147 IDA Wnt-protein binding
GO:0030178 IDA negative regulation of Wnt signaling pathway
GO:0043615 IEA astrocyte cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096554 Apcdd1-201 protein_coding Mus_musculus 0 1729
ENSMUST00000163716 Apcdd1-202 protein_coding Mus_musculus 0 1666

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