C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB6B, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154917 RAB6B 9606 - 3:133824239-133895836 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000285208 RAB6B-001 133824239-133895816 protein_coding
  ENST00000460865 RAB6B-006 133838249-133895836 protein_coding
  ENST00000469959 RAB6B-002 133827748-133895633 protein_coding
  ENST00000477759 RAB6B-003 133838190-133895486 protein_coding
  ENST00000486858 RAB6B-004 133828653-133895453 protein_coding
  ENST00000488969 RAB6B-005 133841326-133894719 protein_coding
  ENST00000543906 RAB6B-201 133824243-133895595 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000285208ENST00000543906
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000285208 1.275±0.00 1.611±0.00 N/A 29.906±5.62 2.180±1.37 4.582±0.00 2.945±2.47 1.558±1.18 0.648±0.00 1.155±0.00 N/A 1.866±0.34 1.687±0.00 2.581±0.46
ENST00000543906 N/A N/A 0.929±0.00 18.687±11.00 N/A 0.604±0.00 1.162±0.59 N/A N/A 0.800±0.00 0.313±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 NAS:IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005794 NAS Golgi apparatus
GO:0006184 NAS:IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006890 NAS retrograde vesicle-mediated transport, Golgi to ER
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0031489 IPI myosin V binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031343 rab6bb RAB6B, member RAS oncogene family b protein_coding Danio_rerio
ENSDARG00000034522 rab6ba RAB6B, member RAS oncogene family a protein_coding Danio_rerio
ENSMUSG00000032549 Rab6b RAB6B, member RAS oncogene family protein_coding Mus_musculus

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