C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB6B, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032549 Rab6b 10090 + 9:103111787-103185276 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035155 Rab6b-001 103111807-103185276 protein_coding
  ENSMUST00000189134 Rab6b-002 103111787-103162657 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035155ENSMUST00000189134
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035155 1.884±1.02 0.994±0.10 2.481±0.34 50.216±31.89 0.355±0.12 1.097±0.66 1.466±0.86 1.167±0.32 0.091±0.06 4.263±2.43 1.644±0.33 1.474±1.03 10.291±7.29 0.563±0.27
ENSMUST00000189134 0.890±0.00 5.858±1.09 N/A N/A 1.054±0.40 0.348±0.06 N/A N/A 0.099±0.03 3.030±0.90 N/A 2.918±0.96 37.907±0.00 0.743±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UG CIL_0005UG_0002 CGP 9:102988712-103185276

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0031410 IEA cytoplasmic vesicle
GO:0031489 IEA myosin V binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031343 rab6bb RAB6B, member RAS oncogene family b protein_coding Danio_rerio
ENSDARG00000034522 rab6ba RAB6B, member RAS oncogene family a protein_coding Danio_rerio
ENSG00000154917 RAB6B RAB6B, member RAS oncogene family protein_coding Homo_sapiens

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