C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SET domain containing 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155542 SETD9 9606 + 5:56909260-56917348 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000285947 SETD9-001 56909260-56917235 protein_coding
  ENST00000418299 SETD9-002 56909615-56917348 nonsense_mediated_decay
  ENST00000423328 SETD9-006 56910105-56911295 protein_coding
  ENST00000463805 SETD9-004 56910060-56916919 processed_transcript
  ENST00000472636 SETD9-005 56910087-56913977 processed_transcript
  ENST00000475908 SETD9-003 56909260-56916944 processed_transcript
  ENST00000477359 SETD9-009 56910777-56913982 processed_transcript
  ENST00000480414 SETD9-008 56909624-56913116 processed_transcript
  ENST00000498322 SETD9-010 56909593-56911588 processed_transcript
  ENST00000624733 SETD9-007 56910912-56911295 TEC

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000285947ENST00000418299ENST00000463805ENST00000475908ENST00000480414ENST00000498322
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000285947 0.609±0.00 0.213±0.00 N/A 0.671±0.00 0.811±0.65 0.476±0.04 1.098±0.00 0.632±0.00 0.462±0.00 N/A 0.213±0.00 0.833±0.38 0.484±0.33 4.069±0.41
ENST00000418299 1.214±0.00 0.251±0.00 1.209±0.00 0.524±0.15 N/A 1.366±0.00 1.064±0.04 1.275±0.03 0.582±0.09 0.429±0.00 N/A 0.432±0.00 0.482±0.06 2.103±0.00
ENST00000463805 N/A N/A N/A 0.902±0.47 N/A N/A 0.619±0.00 N/A 0.495±0.00 N/A 0.707±0.00 N/A 0.622±0.00 3.856±0.52
ENST00000475908 2.348±0.00 0.596±0.00 N/A 0.990±0.00 1.418±0.77 1.911±0.00 3.848±0.00 1.749±0.00 2.305±0.00 1.726±1.19 1.009±0.00 0.925±0.26 0.572±0.30 10.576±0.00
ENST00000480414 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.853±0.00 0.332±0.00 0.689±0.00 0.504±0.00 N/A
ENST00000498322 N/A N/A N/A N/A N/A 0.999±0.00 N/A N/A 0.219±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089D CIL_00089D_0001 VISTA 5:56348801-56951831
CIL_0007FY CIL_0007FY_0002 CGP 5:56909260-56971675

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074456 SETD9 SET domain containing 9 protein_coding Danio_rerio

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