C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: V-set and immunoglobulin domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155659 VSIG4 9606 - X:66021738-66040125 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374737 VSIG4-001 66021738-66040107 protein_coding
  ENST00000412866 VSIG4-003 66021769-66040060 protein_coding
  ENST00000427538 VSIG4-004 66021738-66033664 protein_coding
  ENST00000455586 VSIG4-201 66021740-66040125 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374737ENST00000412866ENST00000427538ENST00000455586
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374737 54.374±0.00 3.087±0.00 0.204±0.00 3.420±2.02 7.814±0.00 2.425±0.51 5.829±5.34 6.335±0.00 4.371±1.97 7.047±3.50 2.771±0.00 3.527±2.37 45.735±23.81 4.715±0.00
ENST00000412866 16.722±0.00 8.425±0.00 N/A N/A 3.867±0.00 2.705±0.00 3.258±0.00 6.825±0.00 5.441±4.34 8.834±0.00 0.282±0.00 1.066±0.73 15.119±4.42 2.697±0.00
ENST00000427538 21.553±0.00 12.938±0.00 0.606±0.00 1.038±0.00 6.972±2.38 2.435±0.00 3.262±2.59 6.161±0.00 7.400±3.33 9.094±2.85 2.921±0.00 1.605±1.08 24.226±0.63 7.531±0.00
ENST00000455586 N/A N/A 0.246±0.00 0.995±0.00 N/A N/A 1.735±0.00 N/A N/A N/A N/A 0.386±0.00 3.338±0.00 0.230±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TP CIL_0001TP_0001 CGP X:65588377-66040125

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0006957 IEA complement activation, alternative pathway
GO:0016021 IEA integral component of membrane
GO:0032703 IEA negative regulation of interleukin-2 production
GO:0042130 IEA negative regulation of T cell proliferation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000044206 Vsig4 V-set and immunoglobulin domain containing 4 protein_coding Mus_musculus

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