C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001TP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147065-ENSG00000155659 CGP 9606 X:65588377-66040125
GeneTranscriptPositionBiotype
ENSG00000147065 (MSN)
moesin
ENST00000360270 (MSN-001) 65667670-65741931 protein_coding
ENST00000429601 (MSN-006) 65588398-65600750 processed_transcript
ENST00000439474 (MSN-004) 65588381-65589769 processed_transcript
ENST00000447323 (MSN-007) 65588404-65593425 processed_transcript
ENST00000609205 (MSN-005) 65588381-65625865 processed_transcript
ENST00000609672 (MSN-003) 65588377-65729589 protein_coding
ENSG00000155659 (VSIG4)
V-set and immunoglobulin domain containing 4
ENST00000374737 (VSIG4-001) 66021738-66040107 protein_coding
ENST00000412866 (VSIG4-003) 66021769-66040060 protein_coding
ENST00000427538 (VSIG4-004) 66021738-66033664 protein_coding
ENST00000455586 (VSIG4-201) 66021740-66040125 protein_coding
ENSG00000217835 (RP6-159A1.2)
ENST00000456392 (RP6-159A1.2-001) 65956289-65957196 processed_pseudogene
ENSG00000230039 (RP11-314A15.2)
ENST00000426799 (RP11-314A15.2-001) 65821255-65822249 processed_pseudogene
ENSG00000233833 (ETF1P3)
eukaryotic translation termination factor 1 pseudogene 3
ENST00000430422 (ETF1P3-001) 65794345-65795835 processed_pseudogene
ENSG00000237311 (RP6-159A1.3)
ENST00000424241 (RP6-159A1.3-001) 65999751-66001071 antisense
ENSG00000274536 (MIR223)
microRNA 223
ENST00000618234 (MIR223-002) 66015461-66020422 antisense
ENST00000621933 (MIR223-001) 66015461-66020422 antisense
CIL_0001TP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031207-ENSMUSG00000044206 CGP 10090 X:96096042-96293438
GeneTranscriptPositionBiotype
ENSMUSG00000031207 (Msn)
moesin
ENSMUST00000117399 (Msn-001) 96096042-96168552 protein_coding
ENSMUST00000135027 (Msn-003) 96096097-96151959 processed_transcript
ENSMUST00000149985 (Msn-002) 96096057-96154039 processed_transcript
ENSMUSG00000044206 (Vsig4)
V-set and immunoglobulin domain containing 4
ENSMUST00000050707 (Vsig4-001) 96247203-96293438 protein_coding
ENSMUST00000146830 (Vsig4-002) 96249950-96293412 processed_transcript
ENSMUSG00000078122 (F630028O10Rik)
RIKEN cDNA F630028O10 gene
ENSMUST00000133125 (F630028O10Rik-001) 96239926-96243636 antisense
ENSMUST00000147681 (F630028O10Rik-002) 96239966-96243636 antisense
ENSMUSG00000081742 (Gm9051)
predicted gene 9051
ENSMUST00000119335 (Gm9051-001) 96224308-96225727 processed_pseudogene
ENSMUSG00000081848 (Gm14925)
predicted gene 14925
ENSMUST00000120611 (Gm14925-001) 96194051-96194488 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TP_0001ENSG00000147065ENST00000360270ENST00000429601ENST00000439474ENST00000447323ENST00000609205ENST00000609672ENSG00000155659ENST00000374737ENST00000412866ENST00000427538ENST00000455586ENSG00000217835ENST00000456392ENSG00000230039ENST00000426799ENSG00000233833ENST00000430422ENSG00000237311ENST00000424241ENSG00000274536ENST00000618234ENST00000621933CIL_0001TP_0002ENSMUSG00000031207ENSMUST00000117399ENSMUST00000135027ENSMUST00000149985ENSMUSG00000044206ENSMUST00000050707ENSMUST00000146830ENSMUSG00000078122ENSMUST00000133125ENSMUST00000147681ENSMUSG00000081742ENSMUST00000119335ENSMUSG00000081848ENSMUST00000120611
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TP_0001ENSG00000147065ENST00000360270ENSG00000155659ENST00000374737ENST00000412866ENST00000427538ENST00000455586ENSG00000217835ENST00000456392ENSG00000230039ENST00000426799ENSG00000233833ENST00000430422ENSG00000237311ENST00000424241ENSG00000274536ENST00000618234ENST00000621933CIL_0001TP_0002ENSMUSG00000031207ENSMUST00000117399ENSMUST00000135027ENSMUST00000149985ENSMUSG00000044206ENSMUST00000050707ENSMUST00000146830ENSMUSG00000078122ENSMUST00000133125ENSMUST00000147681ENSMUSG00000081742ENSMUST00000119335ENSMUSG00000081848ENSMUST00000120611
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147065 ENST00000360270 228.543±0.00 159.835±0.00 27.355±0.00 21.968±14.21 80.634±42.33 63.989±48.41 30.808±18.27 72.550±60.25 33.984±10.33 299.114±239.22 30.325±0.00 47.865±31.67 100.049±34.23 41.727±30.86
ENST00000429601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155659 ENST00000374737 54.374±0.00 3.087±0.00 0.204±0.00 3.420±2.02 7.814±0.00 2.425±0.51 5.829±5.34 6.335±0.00 4.371±1.97 7.047±3.50 2.771±0.00 3.527±2.37 45.735±23.81 4.715±0.00
ENST00000412866 16.722±0.00 8.425±0.00 N/A N/A 3.867±0.00 2.705±0.00 3.258±0.00 6.825±0.00 5.441±4.34 8.834±0.00 0.282±0.00 1.066±0.73 15.119±4.42 2.697±0.00
ENST00000427538 21.553±0.00 12.938±0.00 0.606±0.00 1.038±0.00 6.972±2.38 2.435±0.00 3.262±2.59 6.161±0.00 7.400±3.33 9.094±2.85 2.921±0.00 1.605±1.08 24.226±0.63 7.531±0.00
ENST00000455586 N/A N/A 0.246±0.00 0.995±0.00 N/A N/A 1.735±0.00 N/A N/A N/A N/A 0.386±0.00 3.338±0.00 0.230±0.00
ENSG00000217835 ENST00000456392 0.017±0.00 N/A N/A 0.019±0.00 N/A N/A N/A 0.504±0.00 0.016±0.00 0.141±0.00 0.016±0.00 0.051±0.03 0.043±0.02 0.047±0.00
ENSG00000230039 ENST00000426799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A
ENSG00000233833 ENST00000430422 0.017±0.00 N/A N/A 0.008±0.00 0.008±0.00 N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A 0.023±0.01
ENSG00000237311 ENST00000424241 N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274536 ENST00000618234 0.562±0.00 0.719±0.00 0.290±0.00 0.333±0.14 0.014±0.00 0.213±0.00 0.226±0.00 0.807±0.00 0.328±0.03 0.532±0.00 N/A 0.351±0.23 0.320±0.01 0.119±0.05
ENST00000621933 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.284±0.00 N/A N/A 0.626±0.15 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031207 ENSMUST00000117399 73.325±4.81 40.759±3.08 47.147±0.78 11.334±4.22 98.730±20.61 22.413±2.87 45.693±1.94 51.799±2.38 17.790±11.38 255.879±13.13 8.321±1.94 64.269±8.54 31.343±14.03 1.650±0.48
ENSMUST00000135027 N/A 56.008±18.84 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149985 N/A 41.110±19.95 N/A N/A N/A 8.482±0.91 N/A N/A N/A N/A N/A 29.025±4.56 N/A N/A
ENSMUSG00000044206 ENSMUST00000050707 0.113±0.01 0.118±0.03 0.091±0.00 0.008±0.00 0.151±0.10 N/A 0.422±0.09 0.033±0.01 2.840±2.30 0.253±0.23 0.038±0.01 0.271±0.23 0.085±0.00 0.062±0.01
ENSMUST00000146830 N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078122 ENSMUST00000133125 1.319±0.59 0.310±0.15 1.065±0.00 0.134±0.09 1.889±0.56 0.331±0.17 0.512±0.09 0.211±0.06 4.829±5.85 1.839±0.29 0.103±0.05 0.558±0.34 0.101±0.06 0.084±0.04
ENSMUST00000147681 0.360±0.14 N/A 0.110±0.00 0.034±0.00 0.807±0.16 N/A 0.131±0.00 0.070±0.00 0.610±0.00 0.237±0.00 N/A 0.064±0.00 0.058±0.03 N/A
ENSMUSG00000081742 ENSMUST00000119335 N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.03 N/A N/A N/A 0.006±0.00 N/A
ENSMUSG00000081848 ENSMUST00000120611 N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A

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