C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156170 NDUFAF6 9606 + 8:94895767-95116455 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000396111 NDUFAF6-001 94958008-95058710 protein_coding
  ENST00000396113 NDUFAF6-003 94895813-95058710 protein_coding
  ENST00000396124 NDUFAF6-004 95024986-95058710 protein_coding
  ENST00000454358 NDUFAF6-002 95025068-95057936 nonsense_mediated_decay
  ENST00000517976 NDUFAF6-010 95025021-95057946 nonsense_mediated_decay
  ENST00000518258 NDUFAF6-005 95024994-95057952 nonsense_mediated_decay
  ENST00000518608 NDUFAF6-013 95025068-95047014 nonsense_mediated_decay
  ENST00000519136 NDUFAF6-014 94895837-95047031 protein_coding
  ENST00000519804 NDUFAF6-015 95034649-95047054 protein_coding
  ENST00000520632 NDUFAF6-011 95025033-95047035 nonsense_mediated_decay
  ENST00000520757 NDUFAF6-006 95025068-95076168 nonsense_mediated_decay
  ENST00000521063 NDUFAF6-019 95100394-95103457 processed_transcript
  ENST00000521587 NDUFAF6-017 94974608-94984184 processed_transcript
  ENST00000521840 NDUFAF6-018 94980908-94989348 processed_transcript
  ENST00000522683 NDUFAF6-012 95025066-95036401 nonsense_mediated_decay
  ENST00000523184 NDUFAF6-016 95048466-95116455 processed_transcript
  ENST00000523337 NDUFAF6-009 95025006-95047087 nonsense_mediated_decay
  ENST00000523378 NDUFAF6-008 94895767-95047090 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396111ENST00000396113ENST00000396124ENST00000454358ENST00000517976ENST00000519804ENST00000521840ENST00000522683ENST00000523337ENST00000523378
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396111 N/A N/A N/A 0.616±0.00 N/A N/A N/A N/A N/A 0.540±0.00 N/A N/A N/A N/A
ENST00000396113 0.270±0.00 N/A N/A N/A 0.431±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396124 N/A N/A 0.208±0.00 1.805±0.52 N/A 0.376±0.00 1.612±0.89 1.189±0.00 0.797±0.00 N/A 1.533±0.00 2.642±1.01 1.019±0.24 N/A
ENST00000454358 1.487±0.00 4.607±0.00 N/A 2.178±1.08 3.574±0.00 1.552±1.04 8.519±0.00 2.056±1.17 5.806±0.00 2.454±0.00 4.533±0.00 4.508±1.11 3.451±0.44 9.412±0.00
ENST00000517976 N/A N/A N/A N/A N/A N/A N/A 2.132±0.00 N/A N/A N/A N/A N/A N/A
ENST00000519804 N/A N/A N/A N/A N/A N/A 1.587±0.00 N/A 2.052±0.00 N/A N/A N/A N/A N/A
ENST00000521840 0.421±0.00 N/A N/A 1.074±0.00 0.635±0.00 N/A N/A N/A N/A N/A N/A 3.706±0.00 N/A N/A
ENST00000522683 N/A N/A N/A N/A 1.503±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523337 N/A N/A N/A N/A N/A 1.516±0.00 N/A 1.364±0.00 3.101±0.00 N/A N/A N/A N/A N/A
ENST00000523378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.763±0.00 N/A N/A 3.835±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SX CIL_0006SX_0001 CGP 8:94895767-95116455

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0009058 IEA biosynthetic process
GO:0016740 IEA transferase activity
GO:0032981 IMP mitochondrial respiratory chain complex I assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053652 ndufaf6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 protein_coding Danio_rerio
ENSMUSG00000050323 Ndufaf6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 protein_coding Mus_musculus

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