C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006SX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156170-ENSG00000156170 CGP 9606 8:94895767-95116455
GeneTranscriptPositionBiotype
ENSG00000156170 (NDUFAF6)
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 		ENST00000396111 (NDUFAF6-001) 94958008-95058710 protein_coding
ENST00000396113 (NDUFAF6-003) 94895813-95058710 protein_coding
ENST00000396124 (NDUFAF6-004) 95024986-95058710 protein_coding
ENST00000454358 (NDUFAF6-002) 95025068-95057936 nonsense_mediated_decay
ENST00000517976 (NDUFAF6-010) 95025021-95057946 nonsense_mediated_decay
ENST00000518258 (NDUFAF6-005) 95024994-95057952 nonsense_mediated_decay
ENST00000518608 (NDUFAF6-013) 95025068-95047014 nonsense_mediated_decay
ENST00000519136 (NDUFAF6-014) 94895837-95047031 protein_coding
ENST00000519804 (NDUFAF6-015) 95034649-95047054 protein_coding
ENST00000520632 (NDUFAF6-011) 95025033-95047035 nonsense_mediated_decay
ENST00000520757 (NDUFAF6-006) 95025068-95076168 nonsense_mediated_decay
ENST00000521063 (NDUFAF6-019) 95100394-95103457 processed_transcript
ENST00000521587 (NDUFAF6-017) 94974608-94984184 processed_transcript
ENST00000521840 (NDUFAF6-018) 94980908-94989348 processed_transcript
ENST00000522683 (NDUFAF6-012) 95025066-95036401 nonsense_mediated_decay
ENST00000523184 (NDUFAF6-016) 95048466-95116455 processed_transcript
ENST00000523337 (NDUFAF6-009) 95025006-95047087 nonsense_mediated_decay
ENST00000523378 (NDUFAF6-008) 94895767-95047090 protein_coding
ENSG00000164938 (TP53INP1)
tumor protein p53 inducible nuclear protein 1 		ENST00000342697 (TP53INP1-001) 94925972-94949411 protein_coding
ENST00000448464 (TP53INP1-002) 94925972-94949366 protein_coding
ENSG00000200525 (RNU6-1209P)
RNA, U6 small nuclear 1209, pseudogene 		ENST00000363655 (RNU6-1209P-201) 95055214-95055320 snRNA
ENSG00000245080 (RP11-320N21.1)
 ENST00000501164 (RP11-320N21.1-001) 95066808-95072920 antisense
ENST00000517864 (RP11-320N21.1-003) 95068924-95073182 antisense
ENSG00000253878 (RP11-347C18.3)
 ENST00000519034 (RP11-347C18.3-002) 94950225-94951396 sense_intronic
ENST00000523905 (RP11-347C18.3-001) 94950037-94951396 sense_intronic
ENSG00000254248 (RP11-320N21.2)
 ENST00000518598 (RP11-320N21.2-001) 95071732-95087924 antisense
CIL_0006SX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050323-ENSMUSG00000028211 CGP 10090 4:11051045-11174379
GeneTranscriptPositionBiotype
ENSMUSG00000028211 (Trp53inp1)
transformation related protein 53 inducible nuclear protein 1 		ENSMUST00000029865 (Trp53inp1-001) 11156431-11174379 protein_coding
ENSMUST00000132010 (Trp53inp1-002) 11156441-11174379 processed_transcript
ENSMUST00000132346 (Trp53inp1-004) 11164459-11168014 processed_transcript
ENSMUST00000132693 (Trp53inp1-003) 11156444-11166400 processed_transcript
ENSMUSG00000050323 (Ndufaf6)
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 		ENSMUST00000058183 (Ndufaf6-001) 11051045-11076204 protein_coding
ENSMUST00000124607 (Ndufaf6-005) 11059073-11076149 processed_transcript
ENSMUST00000126468 (Ndufaf6-006) 11051213-11076149 processed_transcript
ENSMUST00000141019 (Ndufaf6-003) 11072992-11076188 processed_transcript
ENSMUST00000144475 (Ndufaf6-007) 11051050-11059083 processed_transcript
ENSMUST00000148127 (Ndufaf6-002) 11070254-11076205 processed_transcript
ENSMUST00000154122 (Ndufaf6-004) 11062052-11076183 processed_transcript
ENSMUSG00000081490 (Gm11830)
predicted gene 11830 		ENSMUST00000120175 (Gm11830-001) 11144710-11145270 processed_pseudogene
ENSMUSG00000083025 (Gm11829)
predicted gene 11829 		ENSMUST00000121003 (Gm11829-001) 11133327-11133608 processed_pseudogene
ENSMUSG00000086765 (Gm11827)
predicted gene 11827 		ENSMUST00000142297 (Gm11827-002) 11123958-11126998 lincRNA
ENSMUST00000151138 (Gm11827-001) 11122805-11126998 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SX_0001ENSG00000156170ENST00000396111ENST00000396113ENST00000396124ENST00000454358ENST00000517976ENST00000519804ENST00000521840ENST00000522683ENST00000523337ENST00000523378ENSG00000164938ENST00000342697ENST00000448464ENSG00000200525ENST00000363655ENSG00000245080ENST00000501164ENST00000517864ENSG00000253878ENST00000519034ENST00000523905ENSG00000254248ENST00000518598CIL_0006SX_0002ENSMUSG00000028211ENSMUST00000029865ENSMUST00000132010ENSMUST00000132693ENSMUSG00000050323ENSMUST00000058183ENSMUST00000124607ENSMUST00000126468ENSMUST00000141019ENSMUST00000144475ENSMUST00000148127ENSMUST00000154122ENSMUSG00000081490ENSMUST00000120175ENSMUSG00000083025ENSMUST00000121003ENSMUSG00000086765ENSMUST00000142297ENSMUST00000151138
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156170 ENST00000396111 N/A N/A N/A 0.616±0.00 N/A N/A N/A N/A N/A 0.540±0.00 N/A N/A N/A N/A
ENST00000396113 0.270±0.00 N/A N/A N/A 0.431±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396124 N/A N/A 0.208±0.00 1.805±0.52 N/A 0.376±0.00 1.612±0.89 1.189±0.00 0.797±0.00 N/A 1.533±0.00 2.642±1.01 1.019±0.24 N/A
ENST00000454358 1.487±0.00 4.607±0.00 N/A 2.178±1.08 3.574±0.00 1.552±1.04 8.519±0.00 2.056±1.17 5.806±0.00 2.454±0.00 4.533±0.00 4.508±1.11 3.451±0.44 9.412±0.00
ENST00000517976 N/A N/A N/A N/A N/A N/A N/A 2.132±0.00 N/A N/A N/A N/A N/A N/A
ENST00000518258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519804 N/A N/A N/A N/A N/A N/A 1.587±0.00 N/A 2.052±0.00 N/A N/A N/A N/A N/A
ENST00000520632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521840 0.421±0.00 N/A N/A 1.074±0.00 0.635±0.00 N/A N/A N/A N/A N/A N/A 3.706±0.00 N/A N/A
ENST00000522683 N/A N/A N/A N/A 1.503±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523337 N/A N/A N/A N/A N/A 1.516±0.00 N/A 1.364±0.00 3.101±0.00 N/A N/A N/A N/A N/A
ENST00000523378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.763±0.00 N/A N/A 3.835±0.00
ENSG00000164938 ENST00000342697 0.892±0.00 N/A 2.339±0.00 N/A 1.012±0.00 2.183±0.00 0.572±0.00 1.757±0.00 1.882±0.57 4.176±2.30 0.706±0.47 2.115±1.48 1.900±1.43 7.040±0.42
ENST00000448464 5.324±0.00 9.468±0.00 N/A 1.239±0.28 6.059±0.00 1.399±0.00 1.414±0.93 5.664±0.00 4.179±3.06 2.501±0.00 N/A 1.973±0.97 1.583±0.54 8.051±3.35
ENSG00000200525 ENST00000363655 N/A N/A N/A N/A 0.186±0.00 N/A 0.707±0.00 N/A 0.518±0.00 N/A N/A N/A N/A N/A
ENSG00000245080 ENST00000501164 N/A N/A N/A 0.021±0.00 0.005±0.00 0.181±0.00 N/A N/A N/A N/A N/A 0.027±0.02 0.034±0.00 4.169±0.81
ENST00000517864 N/A N/A N/A 0.243±0.00 N/A N/A N/A N/A N/A 0.031±0.00 N/A N/A 0.055±0.00 6.044±0.00
ENSG00000253878 ENST00000519034 N/A N/A N/A 0.338±0.00 0.704±0.00 N/A 0.371±0.00 N/A 1.158±0.00 0.383±0.00 0.229±0.00 0.634±0.38 0.048±0.00 N/A
ENST00000523905 0.174±0.00 0.971±0.00 N/A N/A 0.418±0.00 0.153±0.00 0.545±0.00 0.217±0.00 0.333±0.00 0.278±0.00 0.075±0.00 0.341±0.14 0.157±0.01 1.642±0.65
ENSG00000254248 ENST00000518598 N/A 0.179±0.00 N/A 0.074±0.00 N/A 0.085±0.00 N/A N/A N/A 0.155±0.00 0.020±0.00 N/A 0.028±0.00 0.102±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028211 ENSMUST00000029865 4.399±1.40 4.223±0.73 3.235±0.47 4.319±2.76 3.642±2.05 4.050±1.82 1.271±0.27 2.264±0.55 2.016±1.18 6.044±1.06 1.083±0.47 7.082±2.36 2.557±1.58 1.369±0.43
ENSMUST00000132010 0.896±0.14 1.807±0.00 2.187±0.39 0.781±0.42 2.156±1.00 4.548±1.82 0.529±0.03 1.248±0.37 2.224±1.63 3.411±1.16 0.721±0.26 4.361±2.69 3.268±1.82 0.565±0.32
ENSMUST00000132346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.332±0.00 N/A N/A
ENSMUSG00000050323 ENSMUST00000058183 1.175±0.31 5.327±4.78 3.358±0.42 4.516±0.97 1.170±0.65 2.199±0.99 3.476±1.35 6.371±1.56 5.589±1.87 0.508±0.00 6.368±0.76 3.089±1.48 5.034±2.85 0.322±0.00
ENSMUST00000124607 0.873±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.411±0.19 N/A N/A
ENSMUST00000126468 1.159±0.37 N/A 1.005±0.00 2.992±1.69 3.127±0.85 1.327±0.00 1.953±0.00 4.420±1.49 1.288±0.04 1.549±0.51 1.799±0.00 1.857±0.66 N/A 0.393±0.21
ENSMUST00000141019 N/A 7.652±5.51 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.460±0.00 N/A
ENSMUST00000148127 5.181±1.96 19.341±8.73 N/A N/A 9.474±4.31 7.434±2.12 5.025±1.11 14.365±5.25 11.584±1.99 3.807±1.73 N/A 9.536±3.20 N/A 0.822±0.41
ENSMUST00000154122 N/A N/A N/A 13.405±0.00 N/A N/A N/A N/A N/A N/A N/A 6.903±3.77 20.366±7.44 0.749±0.00
ENSMUSG00000081490 ENSMUST00000120175 N/A N/A 0.018±0.00 N/A 0.111±0.01 0.428±0.16 N/A N/A 0.043±0.00 N/A 0.155±0.05 0.132±0.04 0.119±0.10 0.087±0.00
ENSMUSG00000083025 ENSMUST00000121003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.196±0.00
ENSMUSG00000086765 ENSMUST00000142297 0.124±0.03 0.590±0.30 0.050±0.00 0.071±0.00 0.652±0.21 N/A N/A 0.486±0.16 0.187±0.05 0.268±0.14 0.531±0.20 0.583±0.33 0.029±0.00 N/A
ENSMUST00000151138 N/A 0.379±0.04 0.182±0.00 0.024±0.00 0.273±0.19 0.143±0.08 0.251±0.13 0.220±0.09 0.167±0.12 0.202±0.13 0.117±0.00 0.897±0.67 0.131±0.14 0.063±0.03

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