C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: claudin 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156284 CLDN8 9606 - 21:30214006-30216073 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000399899 CLDN8-001 30214006-30216073 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399899
Transcript ID Adipose Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399899 0.019±0.00 6.421±0.00 1.674±0.50 1.427±1.23 30.519±0.00 0.057±0.04 1.254±0.95 0.004±0.00 0.054±0.03 0.398±0.41 0.682±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RK CIL_0000RK_0001 CGP 21:30165564-30216073
CIL_0000TG CIL_0000TG_0001 CGP 21:30214006-30282958

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0005923 ISS tight junction
GO:0016021 IEA integral component of membrane
GO:0016323 IEA basolateral plasma membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 ISS identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040628 CLDN17 claudin 17 protein_coding Danio_rerio
ENSMUSG00000050520 Cldn8 claudin 8 protein_coding Mus_musculus

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