C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: claudin 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050520 Cldn8 10090 - 16:88560828-88563183 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049697 Cldn8-001 88560828-88563183 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049697
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049697 2.330±2.27 35.665±9.84 0.071±0.00 3.116±0.48 54.587±3.73 0.062±0.02 33.924±5.32 0.077±0.06 2.845±0.28 0.019±0.00 1.852±0.77 0.110±0.11 1.558±1.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RK CIL_0000RK_0002 CGP 16:88505807-88563183
CIL_0000TG CIL_0000TG_0002 CGP 16:88560828-88612279

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0005923 IDA tight junction
GO:0016021 NAS integral component of membrane
GO:0016323 IDA basolateral plasma membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 ISS identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040628 CLDN17 claudin 17 protein_coding Danio_rerio
ENSG00000156284 CLDN8 claudin 8 protein_coding Homo_sapiens

Loading