C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase family, AAA domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156802 ATAD2 9606 - 8:123319850-123416350 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000287394 ATAD2-001 123319850-123396465 protein_coding
  ENST00000517666 ATAD2-003 123319850-123396434 nonsense_mediated_decay
  ENST00000519124 ATAD2-005 123320681-123396379 nonsense_mediated_decay
  ENST00000521496 ATAD2-004 123344513-123396401 retained_intron
  ENST00000521903 ATAD2-002 123320502-123416350 protein_coding
  ENST00000530065 ATAD2-006 123372662-123380914 retained_intron
  ENST00000534257 ATAD2-007 123359244-123369388 processed_transcript
  ENST00000550993 ATAD2-008 123356100-123357621 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000287394ENST00000517666ENST00000519124ENST00000521496ENST00000521903
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000287394 0.678±0.00 0.250±0.00 N/A 0.505±0.00 1.624±0.00 0.924±0.11 0.765±0.59 0.423±0.10 0.327±0.08 0.795±0.00 0.147±0.00 5.902±5.55 1.670±1.71 7.103±0.00
ENST00000517666 N/A N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 N/A N/A N/A N/A N/A
ENST00000519124 N/A 0.608±0.00 0.242±0.00 0.277±0.00 0.439±0.00 0.452±0.19 2.708±0.00 N/A 0.511±0.00 0.323±0.00 0.127±0.00 0.855±0.53 N/A 2.499±0.00
ENST00000521496 N/A N/A 0.623±0.00 0.383±0.00 N/A 0.936±0.00 0.360±0.00 N/A 0.201±0.00 1.491±0.00 N/A 2.586±0.00 N/A N/A
ENST00000521903 N/A N/A N/A 0.291±0.05 0.281±0.03 N/A 1.074±0.00 0.496±0.08 0.510±0.00 0.537±0.00 N/A N/A N/A 3.163±1.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000591 CIL_000591_0001 CGP 8:123248451-123416350
CIL_000592 CIL_000592_0001 CGP 8:123319850-123467230

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006200 IDA ATP catabolic process
GO:0006351 IEA transcription, DNA-templated
GO:0016887 IDA ATPase activity
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076590 ATAD2 ATPase family, AAA domain containing 2 protein_coding Danio_rerio
ENSMUSG00000022360 Atad2 ATPase family, AAA domain containing 2 protein_coding Mus_musculus

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