C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin IE
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157483 MYO1E 9606 - 15:59132434-59372900 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000288235 MYO1E-001 59132434-59372900 protein_coding
  ENST00000558182 MYO1E-009 59178424-59206761 processed_transcript
  ENST00000558571 MYO1E-003 59227483-59372527 nonsense_mediated_decay
  ENST00000558646 MYO1E-002 59272246-59372871 retained_intron
  ENST00000558814 MYO1E-004 59223059-59264997 processed_transcript
  ENST00000559269 MYO1E-005 59163219-59227590 protein_coding
  ENST00000559412 MYO1E-010 59136366-59153642 protein_coding
  ENST00000559489 MYO1E-006 59208809-59218296 protein_coding
  ENST00000560642 MYO1E-007 59195497-59209000 retained_intron
  ENST00000560749 MYO1E-008 59171897-59208781 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000288235ENST00000558182ENST00000558646ENST00000559412ENST00000560749
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000288235 3.054±0.00 2.273±0.00 2.536±0.00 1.524±0.73 2.527±0.82 4.097±0.97 0.690±0.37 2.363±1.25 1.721±0.17 3.792±0.19 1.081±0.74 3.978±1.24 5.424±0.00 2.351±0.88
ENST00000558182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.104±0.00 N/A N/A N/A
ENST00000558646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.073±0.00 N/A N/A N/A
ENST00000559412 18.600±0.00 12.845±0.00 N/A N/A 11.288±0.00 23.049±0.00 5.724±0.00 13.435±0.00 8.008±0.00 N/A N/A 20.591±0.00 N/A 20.633±0.00
ENST00000560749 15.576±0.00 7.601±0.00 N/A N/A 6.499±0.00 12.630±0.00 N/A 10.948±7.18 N/A 18.705±0.00 0.900±0.00 15.737±0.00 12.334±0.00 8.702±5.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000503 CIL_000503_0002 CGP 15:59105078-59372900

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000146 TAS microfilament motor activity
GO:0001570 IEA vasculogenesis
GO:0001701 IEA in utero embryonic development
GO:0001822 IEA kidney development
GO:0003094 ISS glomerular filtration
GO:0003774 TAS:IEA motor activity
GO:0005515 IPI:IEA protein binding
GO:0005516 IDA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005737 ISS cytoplasm
GO:0005856 IDA cytoskeleton
GO:0005911 ISS cell-cell junction
GO:0005912 ISS adherens junction
GO:0006200 IDA ATP catabolic process
GO:0006807 IEA nitrogen compound metabolic process
GO:0006897 IMP endocytosis
GO:0008152 IEA metabolic process
GO:0015629 TAS actin cytoskeleton
GO:0016459 TAS:IEA myosin complex
GO:0030048 TAS actin filament-based movement
GO:0030097 IEA hemopoiesis
GO:0032836 ISS glomerular basement membrane development
GO:0035091 IDA phosphatidylinositol binding
GO:0035166 IEA post-embryonic hemopoiesis
GO:0042623 IDA ATPase activity, coupled
GO:0045334 IDA clathrin-coated endocytic vesicle
GO:0048008 IEA platelet-derived growth factor receptor signaling pathway
GO:0051015 IDA actin filament binding
GO:0070062 IDA extracellular vesicular exosome
GO:0072015 ISS glomerular visceral epithelial cell development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036179 myo1ea myosin IE, a protein_coding Danio_rerio
ENSMUSG00000032220 Myo1e myosin IE protein_coding Mus_musculus

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