C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 12 open reading frame 43
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157895 C12orf43 9606 - 12:121000486-121016502 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000288757 C12orf43-001 121000486-121016487 protein_coding
  ENST00000445832 C12orf43-201 121002422-121012448 protein_coding
  ENST00000502891 C12orf43-011 121003791-121007229 retained_intron
  ENST00000508193 C12orf43-010 121005924-121016480 retained_intron
  ENST00000535367 C12orf43-006 121004242-121016345 protein_coding
  ENST00000536407 C12orf43-009 121003837-121016487 protein_coding
  ENST00000537817 C12orf43-002 121003793-121016502 protein_coding
  ENST00000538296 C12orf43-008 121004216-121016429 protein_coding
  ENST00000539088 C12orf43-007 121004288-121016446 nonsense_mediated_decay
  ENST00000539736 C12orf43-005 121003892-121016487 protein_coding
  ENST00000546272 C12orf43-003 121003876-121011149 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000288757ENST00000445832ENST00000502891ENST00000536407ENST00000538296ENST00000539088ENST00000539736
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000288757 0.517±0.00 N/A 1.293±0.45 N/A 1.731±1.24 0.058±0.00 1.770±0.71 3.815±0.00 N/A 0.417±0.00 1.351±0.00 1.098±0.36 1.104±0.19
ENST00000445832 4.582±0.00 7.915±0.00 4.203±2.21 2.623±2.22 3.080±0.00 1.398±0.97 N/A 0.823±0.00 1.732±1.45 0.664±0.42 2.651±0.14 3.889±1.43 2.760±1.51
ENST00000502891 N/A N/A N/A N/A 0.921±0.00 N/A N/A N/A 0.533±0.00 0.124±0.00 N/A N/A N/A
ENST00000536407 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.310±0.00 N/A 11.149±0.00 6.581±0.00
ENST00000538296 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.501±0.00 N/A N/A N/A
ENST00000539088 N/A N/A N/A N/A N/A N/A 5.318±0.00 N/A N/A N/A N/A N/A N/A
ENST00000539736 N/A N/A N/A N/A N/A N/A N/A N/A 0.590±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075Z CIL_00075Z_0002 CGP 12:120978543-121016502

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000046141 C8H12orf43 chromosome 12 open reading frame 43 protein_coding Danio_rerio
ENSMUSG00000029559 2210016L21Rik RIKEN cDNA 2210016L21 gene protein_coding Mus_musculus

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