C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2210016L21 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029559 2210016L21Rik 10090 + 5:114942158-114949783 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031538 2210016L21Rik-001 114942158-114949783 protein_coding
  ENSMUST00000131427 2210016L21Rik-004 114942210-114946846 nonsense_mediated_decay
  ENSMUST00000131771 2210016L21Rik-003 114945805-114947784 nonsense_mediated_decay
  ENSMUST00000140090 2210016L21Rik-005 114942231-114946217 retained_intron
  ENSMUST00000147743 2210016L21Rik-002 114942204-114946880 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031538ENSMUST00000131427ENSMUST00000131771ENSMUST00000147743
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031538 4.228±0.78 2.703±0.44 3.418±1.44 13.343±5.09 1.571±0.65 6.968±0.86 2.779±0.54 8.460±0.56 2.812±0.79 3.530±0.32 2.395±1.60 4.177±1.81 4.693±1.43 1.034±0.25
ENSMUST00000131427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.201±0.00 N/A
ENSMUST00000131771 N/A N/A 12.659±0.00 33.750±0.00 N/A N/A N/A N/A N/A N/A 6.751±0.00 19.595±0.00 16.717±3.71 2.535±0.00
ENSMUST00000147743 4.862±1.65 9.250±4.15 5.870±0.00 12.059±5.06 5.285±2.42 14.243±0.00 1.410±0.13 N/A N/A 4.840±1.27 N/A 14.296±3.63 N/A 1.032±0.16

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000046141 C8H12orf43 chromosome 12 open reading frame 43 protein_coding Danio_rerio
ENSG00000157895 C12orf43 chromosome 12 open reading frame 43 protein_coding Homo_sapiens

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