C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 166
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000158717 RNF166 9606 - 16:88696495-88706421 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312838 RNF166-001 88696495-88706421 protein_coding
  ENST00000537718 RNF166-007 88696502-88700603 protein_coding
  ENST00000541206 RNF166-002 88696536-88703617 protein_coding
  ENST00000562499 RNF166-004 88701297-88703602 processed_transcript
  ENST00000562544 RNF166-011 88696499-88706262 protein_coding
  ENST00000564894 RNF166-006 88700756-88701650 processed_transcript
  ENST00000565083 RNF166-010 88697296-88698183 processed_transcript
  ENST00000567408 RNF166-012 88696499-88699706 protein_coding
  ENST00000567844 RNF166-003 88697479-88706398 protein_coding
  ENST00000568683 RNF166-009 88697394-88700056 protein_coding
  ENST00000569478 RNF166-005 88701317-88703241 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312838ENST00000537718ENST00000541206ENST00000562499ENST00000562544ENST00000564894ENST00000565083ENST00000567844ENST00000568683
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312838 4.312±0.00 N/A N/A 1.863±0.25 2.418±2.21 N/A 2.850±0.00 4.461±0.00 1.658±0.41 0.609±0.00 5.785±0.00 3.727±3.16 4.058±1.16 2.759±1.45
ENST00000537718 N/A 6.769±0.00 N/A 1.361±0.00 N/A 2.304±0.00 N/A N/A N/A N/A N/A 4.293±0.90 3.971±0.30 2.448±0.73
ENST00000541206 0.845±0.00 3.683±0.00 N/A 0.489±0.00 N/A N/A 0.567±0.00 1.155±0.00 N/A 2.763±0.00 N/A 1.505±0.00 1.417±0.00 N/A
ENST00000562499 N/A N/A N/A N/A N/A N/A N/A 1.081±0.00 N/A N/A N/A N/A N/A N/A
ENST00000562544 N/A N/A N/A 2.863±0.00 1.362±0.00 N/A N/A 2.412±0.00 N/A N/A 3.435±0.00 0.710±0.00 N/A N/A
ENST00000564894 N/A N/A N/A N/A 0.777±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565083 N/A N/A 0.975±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567844 N/A N/A N/A N/A N/A N/A 2.708±0.00 N/A N/A N/A N/A 0.807±0.00 N/A N/A
ENST00000568683 N/A N/A N/A 0.804±0.00 0.146±0.00 0.442±0.00 N/A 0.803±0.00 0.306±0.00 2.930±0.00 0.316±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000575 CIL_000575_0002 CGP 16:88677682-88706421
CIL_00091T CIL_00091T_0001 VISTA 16:88690989-89294615
CIL_0000Y8 CIL_0000Y8_0002 CGP 16:88696495-88715386

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086394 RNF166 (1 of 2) ring finger protein 166 protein_coding Danio_rerio
ENSDARG00000089538 RNF166 (2 of 2) ring finger protein 166 protein_coding Danio_rerio
ENSMUSG00000014470 Rnf166 ring finger protein 166 protein_coding Mus_musculus

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