Source ID |
Type |
Tax ID |
Position |
hs1854 |
VISTA |
10090 |
8:122411841-123013825 |
Gene | Transcript | Position | Biotype |
Notice (8): Undefined index: CIL_00091T_0002 [APP/View/Region/show.ctp, line 46]Code Context
<tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
<?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
'region_arr' => array(
'CIL_00091T_0001' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
)
),
'gene_desc_arr' => array(
'ENSG00000103335' => 'piezo-type mechanosensitive ion channel component 1',
'ENSG00000129910' => 'cadherin 15, type 1, M-cadherin (myotubule)',
'ENSG00000129993' => 'core-binding factor, runt domain, alpha subunit 2; translocated to, 3',
'ENSG00000141012' => 'galactosamine (N-acetyl)-6-sulfatase',
'ENSG00000158717' => 'ring finger protein 166',
'ENSG00000167513' => 'chromatin licensing and DNA replication factor 1',
'ENSG00000167515' => 'trafficking protein particle complex 2-like',
'ENSG00000167522' => 'ankyrin repeat domain 11',
'ENSG00000170100' => 'zinc finger protein 778',
'ENSG00000174177' => 'cytosolic thiouridylase subunit 2 homolog (S. pombe)',
'ENSG00000176715' => 'acyl-CoA synthetase family member 3',
'ENSG00000180422' => 'long intergenic non-protein coding RNA 304',
'ENSG00000182376' => null,
'ENSG00000198931' => 'adenine phosphoribosyltransferase',
'ENSG00000205015' => null,
'ENSG00000205018' => null,
'ENSG00000205022' => 'poly(A) binding protein, nuclear 1-like (cytoplasmic)',
'ENSG00000224888' => null,
'ENSG00000256982' => null,
'ENSG00000259803' => 'solute carrier family 22, member 31',
'ENSG00000259813' => null,
'ENSG00000259877' => null,
'ENSG00000259881' => null,
'ENSG00000259989' => null,
'ENSG00000260121' => null,
'ENSG00000260617' => null,
'ENSG00000260659' => null,
'ENSG00000261226' => null,
'ENSG00000261546' => null,
'ENSG00000265672' => 'microRNA 4722',
'ENSG00000268218' => null,
'ENSG00000278341' => null,
'ENSMUSG00000006362' => 'core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)',
'ENSMUSG00000006517' => 'mevalonate (diphospho) decarboxylase',
'ENSMUSG00000006519' => 'cytochrome b-245, alpha polypeptide',
'ENSMUSG00000006585' => 'chromatin licensing and DNA replication factor 1',
'ENSMUSG00000006587' => 'snail family zinc finger 3',
'ENSMUSG00000006589' => 'adenine phosphoribosyl transferase',
'ENSMUSG00000014444' => 'piezo-type mechanosensitive ion channel component 1',
'ENSMUSG00000014470' => 'ring finger protein 166',
'ENSMUSG00000015013' => 'trafficking protein particle complex 2-like',
'ENSMUSG00000015016' => 'acyl-CoA synthetase family member 3',
'ENSMUSG00000015027' => 'galactosamine (N-acetyl)-6-sulfate sulfatase',
'ENSMUSG00000017478' => 'zinc finger CCCH-type containing 18',
'ENSMUSG00000031962' => 'cadherin 15',
'ENSMUSG00000035569' => 'ankyrin repeat domain 11',
'ENSMUSG00000046108' => 'interleukin 17C',
'ENSMUSG00000049482' => 'cytosolic thiouridylase subunit 2 homolog (S. pombe)',
'ENSMUSG00000065080' => 'predicted gene, 26497',
'ENSMUSG00000065915' => 'predicted gene, 24445',
'ENSMUSG00000069867' => 'poly(A)binding protein nuclear 1-like',
'ENSMUSG00000085917' => 'predicted gene 15899',
'ENSMUSG00000090174' => 'predicted gene 10612',
'ENSMUSG00000093124' => 'predicted gene, 24366',
'ENSMUSG00000095762' => 'predicted gene 16378',
'ENSMUSG00000098500' => 'microRNA 6396'
),
'gene_name_arr' => array(
'ENSG00000103335' => 'PIEZO1',
'ENSG00000129910' => 'CDH15',
'ENSG00000129993' => 'CBFA2T3',
'ENSG00000141012' => 'GALNS',
'ENSG00000158717' => 'RNF166',
'ENSG00000167513' => 'CDT1',
'ENSG00000167515' => 'TRAPPC2L',
'ENSG00000167522' => 'ANKRD11',
'ENSG00000170100' => 'ZNF778',
'ENSG00000174177' => 'CTU2',
'ENSG00000176715' => 'ACSF3',
'ENSG00000180422' => 'LINC00304',
'ENSG00000182376' => 'RP5-1142A6.8',
'ENSG00000198931' => 'APRT',
'ENSG00000205015' => 'RP11-46C24.3',
'ENSG00000205018' => 'RP11-830F9.6',
'ENSG00000205022' => 'PABPN1L',
'ENSG00000224888' => 'RP5-1142A6.2',
'ENSG00000256982' => 'CTD-2555A7.2',
'ENSG00000259803' => 'SLC22A31',
'ENSG00000259813' => 'RP5-1142A6.5',
'ENSG00000259877' => 'RP11-46C24.7',
'ENSG00000259881' => 'RP11-830F9.5',
'ENSG00000259989' => 'CTD-2555A7.1',
'ENSG00000260121' => 'RP5-1142A6.9',
'ENSG00000260617' => 'RP5-1142A6.7',
'ENSG00000260659' => 'RP11-46C24.6',
'ENSG00000261226' => 'RP11-830F9.7',
'ENSG00000261546' => 'CTD-2555A7.3',
'ENSG00000265672' => 'MIR4722',
'ENSG00000268218' => 'AC137932.4',
'ENSG00000278341' => 'RP5-1142A6.10',
'ENSMUSG00000006362' => 'Cbfa2t3',
'ENSMUSG00000006517' => 'Mvd',
'ENSMUSG00000006519' => 'Cyba',
'ENSMUSG00000006585' => 'Cdt1',
'ENSMUSG00000006587' => 'Snai3',
'ENSMUSG00000006589' => 'Aprt',
'ENSMUSG00000014444' => 'Piezo1',
'ENSMUSG00000014470' => 'Rnf166',
'ENSMUSG00000015013' => 'Trappc2l',
'ENSMUSG00000015016' => 'Acsf3',
'ENSMUSG00000015027' => 'Galns',
'ENSMUSG00000017478' => 'Zc3h18',
'ENSMUSG00000031962' => 'Cdh15',
'ENSMUSG00000035569' => 'Ankrd11',
'ENSMUSG00000046108' => 'Il17c',
'ENSMUSG00000049482' => 'Ctu2',
'ENSMUSG00000065080' => 'Gm26497',
'ENSMUSG00000065915' => 'Gm24445',
'ENSMUSG00000069867' => 'Pabpn1l',
'ENSMUSG00000085917' => 'Gm15899',
'ENSMUSG00000090174' => 'Gm10612',
'ENSMUSG00000093124' => 'Gm24366',
'ENSMUSG00000095762' => 'Gm16378',
'ENSMUSG00000098500' => 'Mir6396'
),
'accession_table' => array(
(int) 0 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 1 => array(
'region_elements' => array(
[maximum depth reached]
)
)
),
'all_tissues' => array(
(int) 0 => 'Adipose',
(int) 27 => 'Adrenal',
(int) 61 => 'Bladder',
(int) 75 => 'Brain',
(int) 126 => 'Breast',
(int) 168 => 'Colon',
(int) 208 => 'Heart',
(int) 247 => 'Kidney',
(int) 296 => 'Liver',
(int) 345 => 'Lung',
(int) 389 => 'Muscle',
(int) 430 => 'Ovary',
(int) 484 => 'Placenta',
(int) 523 => 'Testis'
),
'column_titles' => array(
(int) 0 => 'Region Sub-Accession',
(int) 1 => 'Tax ID',
(int) 2 => 'Position',
(int) 3 => 'Region Length'
),
'geneviewer' => array(
(int) 9606 => array(
'version' => 'GRCh38',
'coord_key' => 'Homo sapiens',
'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCh38.2bit',
'bwgURI' => '/static/files/GRCh38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 10090 => array(
'version' => 'GRCm38',
'coord_key' => 'Mus musculus',
'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCm38.2bit',
'bwgURI' => '/static/files/GRCm38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 7955 => array(
'version' => 'Zv9',
'coord_key' => 'Danio rerio',
'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
'twoBitURI' => '/static/files/Zv9.2bit',
'bwgURI' => '/static/files/Zv9.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
)
),
'transcript_count' => (int) 229,
'longest_tissue_len' => (int) 8,
'transcript_data' => array(
'ENST00000301015' => array(
'start' => '88715346',
'end' => '88785211',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-001'
),
'ENST00000327397' => array(
'start' => '88715491',
'end' => '88717611',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-201'
),
'ENST00000419505' => array(
'start' => '88715343',
'end' => '88719890',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'PIEZO1-003'
),
'ENST00000466823' => array(
'start' => '88717722',
'end' => '88720258',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-017'
),
'ENST00000472168' => array(
'start' => '88715816',
'end' => '88716792',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-013'
),
'ENST00000474606' => array(
'start' => '88722982',
'end' => '88726344',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-009'
),
'ENST00000475586' => array(
'start' => '88723947',
'end' => '88726025',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-008'
),
'ENST00000484567' => array(
'start' => '88715343',
'end' => '88718318',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-004'
),
'ENST00000490756' => array(
'start' => '88732464',
'end' => '88732980',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-006'
),
'ENST00000491917' => array(
'start' => '88727074',
'end' => '88727843',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-007'
),
'ENST00000495568' => array(
'start' => '88717023',
'end' => '88720473',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-010'
),
'ENST00000497793' => array(
'start' => '88718972',
'end' => '88720387',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-011'
),
'ENST00000518793' => array(
'start' => '88715343',
'end' => '88716277',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-015'
),
'ENST00000521877' => array(
'start' => '88715449',
'end' => '88716212',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-014'
),
'ENST00000566414' => array(
'start' => '88722523',
'end' => '88723934',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-016'
),
'ENST00000289746' => array(
'start' => '89171767',
'end' => '89195492',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CDH15-001'
),
'ENST00000521087' => array(
'start' => '89171767',
'end' => '89183605',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'CDH15-002'
),
'ENST00000524089' => array(
'start' => '89171767',
'end' => '89186192',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CDH15-003'
),
'ENST00000268679' => array(
'start' => '88874858',
'end' => '88977204',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-001'
),
'ENST00000327483' => array(
'start' => '88874858',
'end' => '88941198',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-002'
),
'ENST00000562719' => array(
'start' => '88892285',
'end' => '88902515',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-008'
),
'ENST00000563640' => array(
'start' => '88892399',
'end' => '88977080',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-009'
),
'ENST00000563856' => array(
'start' => '88875525',
'end' => '88881157',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CBFA2T3-004'
),
'ENST00000563920' => array(
'start' => '88876228',
'end' => '88880036',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CBFA2T3-005'
),
'ENST00000564416' => array(
'start' => '88898088',
'end' => '88941200',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-011'
),
'ENST00000566868' => array(
'start' => '88879430',
'end' => '88881313',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'CBFA2T3-007'
),
'ENST00000569443' => array(
'start' => '88892244',
'end' => '88941844',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-010'
),
'ENST00000569464' => array(
'start' => '88881112',
'end' => '88941809',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-006'
),
'ENST00000570046' => array(
'start' => '88901558',
'end' => '88957775',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-012'
),
'ENST00000268695' => array(
'start' => '88813734',
'end' => '88856966',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'GALNS-001'
),
'ENST00000561812' => array(
'start' => '88836241',
'end' => '88838922',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'GALNS-010'
),
'ENST00000562593' => array(
'start' => '88813735',
'end' => '88845624',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'GALNS-004'
),
'ENST00000562831' => array(
'start' => '88835755',
'end' => '88856575',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'GALNS-009'
),
'ENST00000562931' => array(
'start' => '88832034',
'end' => '88837849',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'GALNS-012'
),
'ENST00000564263' => array(
'start' => '88824789',
'end' => '88827116',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'GALNS-013'
),
'ENST00000565364' => array(
'start' => '88840335',
'end' => '88856842',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'GALNS-003'
),
'ENST00000566563' => array(
'start' => '88835729',
'end' => '88837889',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'GALNS-011'
),
'ENST00000567525' => array(
'start' => '88813736',
'end' => '88856826',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'GALNS-006'
),
'ENST00000567779' => array(
'start' => '88840698',
'end' => '88842045',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'GALNS-007'
),
'ENST00000568311' => array(
'start' => '88855128',
'end' => '88856970',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'GALNS-002'
),
'ENST00000568613' => array(
'start' => '88814323',
'end' => '88856826',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'GALNS-005'
),
'ENST00000569433' => array(
'start' => '88855753',
'end' => '88856931',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'GALNS-008'
),
'ENST00000312838' => array(
'start' => '88696495',
'end' => '88706421',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-001'
),
'ENST00000537718' => array(
'start' => '88696502',
'end' => '88700603',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-007'
),
'ENST00000541206' => array(
'start' => '88696536',
'end' => '88703617',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-002'
),
'ENST00000562499' => array(
'start' => '88701297',
'end' => '88703602',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'RNF166-004'
),
'ENST00000562544' => array(
'start' => '88696499',
'end' => '88706262',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-011'
),
'ENST00000564894' => array(
'start' => '88700756',
'end' => '88701650',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'RNF166-006'
),
'ENST00000565083' => array(
'start' => '88697296',
'end' => '88698183',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'RNF166-010'
),
'ENST00000567408' => array(
'start' => '88696499',
'end' => '88699706',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-012'
),
'ENST00000567844' => array(
'start' => '88697479',
'end' => '88706398',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-003'
),
'ENST00000568683' => array(
'start' => '88697394',
'end' => '88700056',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-009'
),
'ENST00000569478' => array(
'start' => '88701317',
'end' => '88703241',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'RNF166-005'
),
'ENST00000301019' => array(
'start' => '88803213',
'end' => '88809258',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CDT1-001'
),
'ENST00000562747' => array(
'start' => '88804611',
'end' => '88806217',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CDT1-003'
),
'ENST00000569140' => array(
'start' => '88805768',
'end' => '88807342',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CDT1-002'
),
'ENST00000301021' => array(
'start' => '88857086',
'end' => '88862686',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TRAPPC2L-001'
),
'ENST00000561840' => array(
'start' => '88857168',
'end' => '88861049',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TRAPPC2L-011'
),
'ENST00000562125' => array(
'start' => '88859301',
'end' => '88861105',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'TRAPPC2L-006'
),
'ENST00000562792' => array(
'start' => '88857127',
'end' => '88859729',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'TRAPPC2L-012'
),
'ENST00000563514' => array(
'start' => '88859771',
'end' => '88861130',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'TRAPPC2L-014'
),
'ENST00000564365' => array(
'start' => '88856220',
'end' => '88861415',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TRAPPC2L-003'
),
'ENST00000564404' => array(
'start' => '88857144',
'end' => '88861110',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'TRAPPC2L-007'
),
'ENST00000564547' => array(
'start' => '88857098',
'end' => '88859512',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'TRAPPC2L-013'
),
'ENST00000565205' => array(
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'transcript_name' => 'Mvd-201'
),
'ENSMUST00000017604' => array(
'start' => '122424772',
'end' => '122432940',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cyba-201'
),
'ENSMUST00000006760' => array(
'start' => '122568015',
'end' => '122573128',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cdt1-201'
),
'ENSMUST00000006762' => array(
'start' => '122454206',
'end' => '122460692',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Snai3-201'
),
'ENSMUST00000006764' => array(
'start' => '122574637',
'end' => '122576907',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Aprt-201'
),
'ENSMUST00000067252' => array(
'start' => '122481698',
'end' => '122551329',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Piezo1-201'
),
'ENSMUST00000123671' => array(
'start' => '122481721',
'end' => '122484780',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-008'
),
'ENSMUST00000126553' => array(
'start' => '122483367',
'end' => '122483869',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-007'
),
'ENSMUST00000128383' => array(
'start' => '122481982',
'end' => '122499885',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Piezo1-001'
),
'ENSMUST00000134304' => array(
'start' => '122482041',
'end' => '122483000',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-006'
),
'ENSMUST00000148497' => array(
'start' => '122485924',
'end' => '122498204',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Piezo1-002'
),
'ENSMUST00000152596' => array(
'start' => '122484865',
'end' => '122485624',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-004'
),
'ENSMUST00000155803' => array(
'start' => '122482080',
'end' => '122482676',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-005'
),
'ENSMUST00000156333' => array(
'start' => '122481712',
'end' => '122499886',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Piezo1-003'
),
'ENSMUST00000014614' => array(
'start' => '122466147',
'end' => '122476064',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Rnf166-001'
),
'ENSMUST00000136356' => array(
'start' => '122466862',
'end' => '122468227',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Rnf166-003'
),
'ENSMUST00000148780' => array(
'start' => '122468009',
'end' => '122475688',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Rnf166-002'
),
'ENSMUST00000015157' => array(
'start' => '122611626',
'end' => '122615588',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Trappc2l-201'
),
'ENSMUST00000015160' => array(
'start' => '122775505',
'end' => '122817880',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Acsf3-201'
),
'ENSMUST00000015171' => array(
'start' => '122578238',
'end' => '122611487',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Galns-201'
),
'ENSMUST00000017622' => array(
'start' => '122376609',
'end' => '122417359',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-001'
),
'ENSMUST00000093073' => array(
'start' => '122376643',
'end' => '122417360',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-002'
),
'ENSMUST00000175798' => array(
'start' => '122408018',
'end' => '122410904',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Zc3h18-010'
),
'ENSMUST00000175819' => array(
'start' => '122403340',
'end' => '122411403',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-008'
),
'ENSMUST00000176629' => array(
'start' => '122376681',
'end' => '122417359',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-005'
),
'ENSMUST00000176699' => array(
'start' => '122376644',
'end' => '122383725',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-007'
),
'ENSMUST00000177049' => array(
'start' => '122411325',
'end' => '122416248',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-009'
),
'ENSMUST00000177123' => array(
'start' => '122407843',
'end' => '122417359',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Zc3h18-004'
),
'ENSMUST00000177195' => array(
'start' => '122403270',
'end' => '122406127',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Zc3h18-011'
),
'ENSMUST00000177386' => array(
'start' => '122376648',
'end' => '122389744',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Zc3h18-003'
),
'ENSMUST00000034443' => array(
'start' => '122848374',
'end' => '122867397',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cdh15-201'
),
'ENSMUST00000098333' => array(
'start' => '122884151',
'end' => '122915987',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ankrd11-201'
),
'ENSMUST00000098334' => array(
'start' => '122883337',
'end' => '122974793',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ankrd11-001'
),
'ENSMUST00000172906' => array(
'start' => '122883822',
'end' => '122974793',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Ankrd11-002'
),
'ENSMUST00000174833' => array(
'start' => '122906063',
'end' => '122974773',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ankrd11-003'
),
'ENSMUST00000050963' => array(
'start' => '122422020',
'end' => '122423639',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Il17c-001'
),
'ENSMUST00000116412' => array(
'start' => '122476143',
'end' => '122483092',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-001'
),
'ENSMUST00000128472' => array(
'start' => '122476693',
'end' => '122478245',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-005'
),
'ENSMUST00000131934' => array(
'start' => '122480922',
'end' => '122481740',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-009'
),
'ENSMUST00000134127' => array(
'start' => '122476220',
'end' => '122479343',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-007'
),
'ENSMUST00000136253' => array(
'start' => '122480957',
'end' => '122481744',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-008'
),
'ENSMUST00000146634' => array(
'start' => '122476213',
'end' => '122478213',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-006'
),
'ENSMUST00000149925' => array(
'start' => '122476243',
'end' => '122478948',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-004'
),
'ENSMUST00000151855' => array(
'start' => '122476209',
'end' => '122484138',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Ctu2-002'
),
'ENSMUST00000154099' => array(
'start' => '122476213',
'end' => '122481741',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-003'
),
'ENSMUST00000083146' => array(
'start' => '122520568',
'end' => '122520674',
'transcript_biotype' => 'snRNA',
'transcript_name' => 'Gm26497-201'
),
'ENSMUST00000083981' => array(
'start' => '122982837',
'end' => '122982943',
'transcript_biotype' => 'snRNA',
'transcript_name' => 'Gm24445-201'
),
'ENSMUST00000093059' => array(
'start' => '122619471',
'end' => '122622739',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Pabpn1l-001'
),
'ENSMUST00000128586' => array(
'start' => '122683602',
'end' => '122683839',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm15899-001'
),
'ENSMUST00000162198' => array(
'start' => '122697860',
'end' => '122700160',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Gm10612-001'
),
'ENSMUST00000175383' => array(
'start' => '122471627',
'end' => '122471712',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'Gm24366-201'
),
'ENSMUST00000179168' => array(
'start' => '122841731',
'end' => '122842072',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm16378-001'
),
'ENSMUST00000183603' => array(
'start' => '122622265',
'end' => '122622375',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'Mir6396-201'
)
),
'accession_map' => array(
'ENST000' => '9606',
'ENSMUST' => '10090',
'ENSDART' => '7955',
'ENSG000' => '9606',
'ENSMUSG' => '10090',
'ENSDARG' => '7955'
),
'sci_name_map' => array(
(int) 9606 => 'Homo_sapiens',
(int) 10090 => 'Mus_musculus',
(int) 7955 => 'Danio_rerio'
),
'UCSC_links' => array(
(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
),
'expressed_region_arr' => array(
'CIL_00091T_0001' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
)
)
)
$region_arr = array(
'CIL_00091T_0001' => array(
'genes_in_region' => array(
'ENSG00000103335' => array(
[maximum depth reached]
),
'ENSG00000129910' => array(
[maximum depth reached]
),
'ENSG00000129993' => array(
[maximum depth reached]
),
'ENSG00000141012' => array(
[maximum depth reached]
),
'ENSG00000158717' => array(
[maximum depth reached]
),
'ENSG00000167513' => array(
[maximum depth reached]
),
'ENSG00000167515' => array(
[maximum depth reached]
),
'ENSG00000167522' => array(
[maximum depth reached]
),
'ENSG00000170100' => array(
[maximum depth reached]
),
'ENSG00000180422' => array(
[maximum depth reached]
),
'ENSG00000182376' => array(
[maximum depth reached]
),
'ENSG00000198931' => array(
[maximum depth reached]
),
'ENSG00000205015' => array(
[maximum depth reached]
),
'ENSG00000205018' => array(
[maximum depth reached]
),
'ENSG00000205022' => array(
[maximum depth reached]
),
'ENSG00000256982' => array(
[maximum depth reached]
),
'ENSG00000259803' => array(
[maximum depth reached]
),
'ENSG00000259813' => array(
[maximum depth reached]
),
'ENSG00000259877' => array(
[maximum depth reached]
),
'ENSG00000259989' => array(
[maximum depth reached]
),
'ENSG00000260121' => array(
[maximum depth reached]
),
'ENSG00000261226' => array(
[maximum depth reached]
),
'ENSG00000265672' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Adipose',
(int) 1 => 'Adrenal',
(int) 2 => 'Brain',
(int) 3 => 'Breast',
(int) 4 => 'Colon',
(int) 5 => 'Heart',
(int) 6 => 'Kidney',
(int) 7 => 'Liver',
(int) 8 => 'Lung',
(int) 9 => 'Muscle',
(int) 10 => 'Ovary',
(int) 11 => 'Placenta',
(int) 12 => 'Testis',
(int) 13 => 'Colon',
(int) 14 => 'Kidney',
(int) 15 => 'Liver',
(int) 16 => 'Brain',
(int) 17 => 'Breast',
(int) 18 => 'Kidney',
(int) 19 => 'Liver',
(int) 20 => 'Lung',
(int) 21 => 'Breast',
(int) 22 => 'Lung',
(int) 23 => 'Muscle',
(int) 24 => 'Ovary',
(int) 25 => 'Testis',
(int) 26 => 'Muscle',
(int) 27 => 'Adrenal',
(int) 28 => 'Brain',
(int) 29 => 'Breast',
(int) 30 => 'Kidney',
(int) 31 => 'Liver',
(int) 32 => 'Lung',
(int) 33 => 'Muscle',
(int) 34 => 'Ovary',
(int) 35 => 'Placenta',
(int) 36 => 'Testis',
(int) 37 => 'Adrenal',
(int) 38 => 'Brain',
(int) 39 => 'Colon',
(int) 40 => 'Kidney',
(int) 41 => 'Lung',
(int) 42 => 'Ovary',
(int) 43 => 'Kidney',
(int) 44 => 'Liver',
(int) 45 => 'Colon',
(int) 46 => 'Adipose',
(int) 47 => 'Adrenal',
(int) 48 => 'Brain',
(int) 49 => 'Colon',
(int) 50 => 'Heart',
(int) 51 => 'Lung',
(int) 52 => 'Muscle',
(int) 53 => 'Ovary',
(int) 54 => 'Testis',
(int) 55 => 'Liver',
(int) 56 => 'Liver',
(int) 57 => 'Adipose',
(int) 58 => 'Adrenal',
(int) 59 => 'Bladder',
(int) 60 => 'Brain',
(int) 61 => 'Breast',
(int) 62 => 'Colon',
(int) 63 => 'Heart',
(int) 64 => 'Kidney',
(int) 65 => 'Liver',
(int) 66 => 'Lung',
(int) 67 => 'Muscle',
(int) 68 => 'Ovary',
(int) 69 => 'Placenta',
(int) 70 => 'Testis',
(int) 71 => 'Brain',
(int) 72 => 'Breast',
(int) 73 => 'Colon',
(int) 74 => 'Liver',
(int) 75 => 'Lung',
(int) 76 => 'Muscle',
(int) 77 => 'Ovary',
(int) 78 => 'Placenta',
(int) 79 => 'Testis',
(int) 80 => 'Ovary',
(int) 81 => 'Heart',
(int) 82 => 'Placenta',
(int) 83 => 'Adrenal',
(int) 84 => 'Bladder',
(int) 85 => 'Brain',
(int) 86 => 'Breast',
(int) 87 => 'Colon',
(int) 88 => 'Heart',
(int) 89 => 'Kidney',
(int) 90 => 'Liver',
(int) 91 => 'Lung',
(int) 92 => 'Muscle',
(int) 93 => 'Ovary',
(int) 94 => 'Placenta',
(int) 95 => 'Testis',
(int) 96 => 'Bladder',
(int) 97 => 'Colon',
(int) 98 => 'Kidney',
(int) 99 => 'Liver',
(int) 100 => 'Lung',
(int) 101 => 'Ovary',
(int) 102 => 'Lung',
(int) 103 => 'Kidney',
(int) 104 => 'Adipose',
(int) 105 => 'Adrenal',
(int) 106 => 'Breast',
(int) 107 => 'Colon',
(int) 108 => 'Heart',
(int) 109 => 'Kidney',
(int) 110 => 'Liver',
(int) 111 => 'Lung',
(int) 112 => 'Ovary',
(int) 113 => 'Testis',
(int) 114 => 'Liver',
(int) 115 => 'Ovary',
(int) 116 => 'Testis',
(int) 117 => 'Adipose',
(int) 118 => 'Brain',
(int) 119 => 'Breast',
(int) 120 => 'Heart',
(int) 121 => 'Kidney',
(int) 122 => 'Liver',
(int) 123 => 'Lung',
(int) 124 => 'Muscle',
(int) 125 => 'Ovary',
(int) 126 => 'Placenta',
(int) 127 => 'Testis',
(int) 128 => 'Adrenal',
(int) 129 => 'Brain',
(int) 130 => 'Colon',
(int) 131 => 'Ovary',
(int) 132 => 'Placenta',
(int) 133 => 'Testis',
(int) 134 => 'Adipose',
(int) 135 => 'Adrenal',
(int) 136 => 'Brain',
(int) 137 => 'Heart',
(int) 138 => 'Kidney',
(int) 139 => 'Lung',
(int) 140 => 'Ovary',
(int) 141 => 'Placenta',
(int) 142 => 'Kidney',
(int) 143 => 'Brain',
(int) 144 => 'Breast',
(int) 145 => 'Kidney',
(int) 146 => 'Muscle',
(int) 147 => 'Ovary',
(int) 148 => 'Breast',
(int) 149 => 'Bladder',
(int) 150 => 'Heart',
(int) 151 => 'Ovary',
(int) 152 => 'Brain',
(int) 153 => 'Breast',
(int) 154 => 'Colon',
(int) 155 => 'Kidney',
(int) 156 => 'Liver',
(int) 157 => 'Lung',
(int) 158 => 'Muscle',
(int) 159 => 'Adipose',
(int) 160 => 'Adrenal',
(int) 161 => 'Brain',
(int) 162 => 'Breast',
(int) 163 => 'Colon',
(int) 164 => 'Heart',
(int) 165 => 'Kidney',
(int) 166 => 'Liver',
(int) 167 => 'Lung',
(int) 168 => 'Muscle',
(int) 169 => 'Ovary',
(int) 170 => 'Placenta',
(int) 171 => 'Testis',
(int) 172 => 'Breast',
(int) 173 => 'Colon',
(int) 174 => 'Placenta',
(int) 175 => 'Brain',
(int) 176 => 'Liver',
(int) 177 => 'Lung',
(int) 178 => 'Adipose',
(int) 179 => 'Adrenal',
(int) 180 => 'Brain',
(int) 181 => 'Breast',
(int) 182 => 'Colon',
(int) 183 => 'Heart',
(int) 184 => 'Kidney',
(int) 185 => 'Muscle',
(int) 186 => 'Ovary',
(int) 187 => 'Placenta',
(int) 188 => 'Testis',
(int) 189 => 'Adrenal',
(int) 190 => 'Brain',
(int) 191 => 'Breast',
(int) 192 => 'Colon',
(int) 193 => 'Heart',
(int) 194 => 'Lung',
(int) 195 => 'Muscle',
(int) 196 => 'Ovary',
(int) 197 => 'Brain',
(int) 198 => 'Heart',
(int) 199 => 'Muscle',
(int) 200 => 'Lung',
(int) 201 => 'Muscle',
(int) 202 => 'Colon',
(int) 203 => 'Liver',
(int) 204 => 'Adipose',
(int) 205 => 'Adrenal',
(int) 206 => 'Brain',
(int) 207 => 'Breast',
(int) 208 => 'Colon',
(int) 209 => 'Heart',
(int) 210 => 'Kidney',
(int) 211 => 'Muscle',
(int) 212 => 'Ovary',
(int) 213 => 'Testis',
(int) 214 => 'Kidney',
(int) 215 => 'Muscle',
(int) 216 => 'Adipose',
(int) 217 => 'Brain',
(int) 218 => 'Breast',
(int) 219 => 'Colon',
(int) 220 => 'Heart',
(int) 221 => 'Kidney',
(int) 222 => 'Liver',
(int) 223 => 'Muscle',
(int) 224 => 'Ovary',
(int) 225 => 'Placenta',
(int) 226 => 'Adipose',
(int) 227 => 'Adrenal',
(int) 228 => 'Brain',
(int) 229 => 'Breast',
(int) 230 => 'Colon',
(int) 231 => 'Heart',
(int) 232 => 'Kidney',
(int) 233 => 'Liver',
(int) 234 => 'Lung',
(int) 235 => 'Muscle',
(int) 236 => 'Ovary',
(int) 237 => 'Placenta',
(int) 238 => 'Testis',
(int) 239 => 'Bladder',
(int) 240 => 'Brain',
(int) 241 => 'Testis',
(int) 242 => 'Liver',
(int) 243 => 'Placenta',
(int) 244 => 'Testis',
(int) 245 => 'Adrenal',
(int) 246 => 'Brain',
(int) 247 => 'Breast',
(int) 248 => 'Heart',
(int) 249 => 'Kidney',
(int) 250 => 'Liver',
(int) 251 => 'Lung',
(int) 252 => 'Ovary',
(int) 253 => 'Kidney',
(int) 254 => 'Brain',
(int) 255 => 'Breast',
(int) 256 => 'Colon',
(int) 257 => 'Heart',
(int) 258 => 'Kidney',
(int) 259 => 'Liver',
(int) 260 => 'Lung',
(int) 261 => 'Muscle',
(int) 262 => 'Ovary',
(int) 263 => 'Bladder',
(int) 264 => 'Breast',
(int) 265 => 'Heart',
(int) 266 => 'Liver',
(int) 267 => 'Lung',
(int) 268 => 'Placenta',
(int) 269 => 'Adipose',
(int) 270 => 'Bladder',
(int) 271 => 'Brain',
(int) 272 => 'Breast',
(int) 273 => 'Colon',
(int) 274 => 'Heart',
(int) 275 => 'Liver',
(int) 276 => 'Lung',
(int) 277 => 'Ovary',
(int) 278 => 'Placenta',
(int) 279 => 'Testis',
(int) 280 => 'Brain',
(int) 281 => 'Breast',
(int) 282 => 'Colon',
(int) 283 => 'Kidney',
(int) 284 => 'Liver',
(int) 285 => 'Muscle',
(int) 286 => 'Brain',
(int) 287 => 'Heart',
(int) 288 => 'Kidney',
(int) 289 => 'Liver',
(int) 290 => 'Muscle',
(int) 291 => 'Brain',
(int) 292 => 'Breast',
(int) 293 => 'Colon',
(int) 294 => 'Heart',
(int) 295 => 'Kidney',
(int) 296 => 'Liver',
(int) 297 => 'Ovary',
(int) 298 => 'Placenta',
(int) 299 => 'Testis',
(int) 300 => 'Brain',
(int) 301 => 'Liver',
(int) 302 => 'Muscle',
(int) 303 => 'Testis',
(int) 304 => 'Brain',
(int) 305 => 'Muscle',
(int) 306 => 'Testis',
(int) 307 => 'Muscle',
(int) 308 => 'Adipose',
(int) 309 => 'Colon',
(int) 310 => 'Kidney',
(int) 311 => 'Liver',
(int) 312 => 'Lung',
(int) 313 => 'Muscle',
(int) 314 => 'Testis',
(int) 315 => 'Adipose',
(int) 316 => 'Adrenal',
(int) 317 => 'Bladder',
(int) 318 => 'Brain',
(int) 319 => 'Breast',
(int) 320 => 'Colon',
(int) 321 => 'Heart',
(int) 322 => 'Kidney',
(int) 323 => 'Liver',
(int) 324 => 'Lung',
(int) 325 => 'Muscle',
(int) 326 => 'Ovary',
(int) 327 => 'Placenta',
(int) 328 => 'Testis',
(int) 329 => 'Adipose',
(int) 330 => 'Bladder',
(int) 331 => 'Brain',
(int) 332 => 'Breast',
(int) 333 => 'Heart',
(int) 334 => 'Kidney',
(int) 335 => 'Liver',
(int) 336 => 'Lung',
(int) 337 => 'Ovary',
(int) 338 => 'Placenta',
(int) 339 => 'Muscle',
(int) 340 => 'Heart',
(int) 341 => 'Kidney',
(int) 342 => 'Muscle',
(int) 343 => 'Ovary',
(int) 344 => 'Placenta',
(int) 345 => 'Heart',
(int) 346 => 'Brain',
(int) 347 => 'Kidney',
(int) 348 => 'Muscle',
(int) 349 => 'Muscle',
(int) 350 => 'Ovary',
(int) 351 => 'Adipose',
(int) 352 => 'Adrenal',
(int) 353 => 'Brain',
(int) 354 => 'Breast',
(int) 355 => 'Heart',
(int) 356 => 'Kidney',
(int) 357 => 'Lung',
(int) 358 => 'Muscle',
(int) 359 => 'Ovary',
(int) 360 => 'Placenta',
(int) 361 => 'Testis',
(int) 362 => 'Brain',
(int) 363 => 'Bladder',
(int) 364 => 'Ovary',
(int) 365 => 'Adrenal',
(int) 366 => 'Brain',
(int) 367 => 'Kidney',
(int) 368 => 'Lung',
(int) 369 => 'Ovary',
(int) 370 => 'Liver',
(int) 371 => 'Ovary',
(int) 372 => 'Testis',
(int) 373 => 'Adipose',
(int) 374 => 'Adrenal',
(int) 375 => 'Brain',
(int) 376 => 'Breast',
(int) 377 => 'Colon',
(int) 378 => 'Kidney',
(int) 379 => 'Liver',
(int) 380 => 'Lung',
(int) 381 => 'Ovary',
(int) 382 => 'Placenta',
(int) 383 => 'Testis',
(int) 384 => 'Adipose',
(int) 385 => 'Adrenal',
(int) 386 => 'Brain',
(int) 387 => 'Breast',
(int) 388 => 'Colon',
(int) 389 => 'Heart',
(int) 390 => 'Kidney',
(int) 391 => 'Liver',
(int) 392 => 'Lung',
(int) 393 => 'Muscle',
(int) 394 => 'Ovary',
(int) 395 => 'Placenta',
(int) 396 => 'Testis',
(int) 397 => 'Adrenal',
(int) 398 => 'Bladder',
(int) 399 => 'Breast',
(int) 400 => 'Colon',
(int) 401 => 'Kidney',
(int) 402 => 'Liver',
(int) 403 => 'Ovary',
(int) 404 => 'Placenta',
(int) 405 => 'Testis',
(int) 406 => 'Bladder',
(int) 407 => 'Brain',
(int) 408 => 'Colon',
(int) 409 => 'Heart',
(int) 410 => 'Kidney',
(int) 411 => 'Liver',
(int) 412 => 'Lung',
(int) 413 => 'Muscle',
(int) 414 => 'Ovary',
(int) 415 => 'Placenta',
(int) 416 => 'Testis',
(int) 417 => 'Adipose',
(int) 418 => 'Adrenal',
(int) 419 => 'Brain',
(int) 420 => 'Breast',
(int) 421 => 'Colon',
(int) 422 => 'Heart',
(int) 423 => 'Kidney',
(int) 424 => 'Liver',
(int) 425 => 'Lung',
(int) 426 => 'Muscle',
(int) 427 => 'Ovary',
(int) 428 => 'Placenta',
(int) 429 => 'Testis',
(int) 430 => 'Liver',
(int) 431 => 'Ovary',
(int) 432 => 'Placenta',
(int) 433 => 'Testis',
(int) 434 => 'Adrenal',
(int) 435 => 'Brain',
(int) 436 => 'Breast',
(int) 437 => 'Colon',
(int) 438 => 'Heart',
(int) 439 => 'Kidney',
(int) 440 => 'Liver',
(int) 441 => 'Lung',
(int) 442 => 'Testis',
(int) 443 => 'Liver',
(int) 444 => 'Adipose',
(int) 445 => 'Adrenal',
(int) 446 => 'Brain',
(int) 447 => 'Muscle',
(int) 448 => 'Ovary',
(int) 449 => 'Brain',
(int) 450 => 'Adrenal',
(int) 451 => 'Breast',
(int) 452 => 'Adipose',
(int) 453 => 'Breast',
(int) 454 => 'Colon',
(int) 455 => 'Heart',
(int) 456 => 'Kidney',
(int) 457 => 'Liver',
(int) 458 => 'Lung',
(int) 459 => 'Muscle',
(int) 460 => 'Placenta',
(int) 461 => 'Testis',
(int) 462 => 'Kidney',
(int) 463 => 'Lung',
(int) 464 => 'Placenta',
(int) 465 => 'Testis',
(int) 466 => 'Adipose',
(int) 467 => 'Adrenal',
(int) 468 => 'Brain',
(int) 469 => 'Breast',
(int) 470 => 'Colon',
(int) 471 => 'Heart',
(int) 472 => 'Kidney',
(int) 473 => 'Liver',
(int) 474 => 'Lung',
(int) 475 => 'Ovary',
(int) 476 => 'Placenta',
(int) 477 => 'Testis',
(int) 478 => 'Ovary',
(int) 479 => 'Adrenal',
(int) 480 => 'Brain',
(int) 481 => 'Heart',
(int) 482 => 'Ovary',
(int) 483 => 'Testis',
(int) 484 => 'Liver',
(int) 485 => 'Adrenal',
(int) 486 => 'Brain',
(int) 487 => 'Colon',
(int) 488 => 'Lung',
(int) 489 => 'Adrenal',
(int) 490 => 'Colon',
(int) 491 => 'Kidney',
(int) 492 => 'Lung',
(int) 493 => 'Ovary',
(int) 494 => 'Placenta',
(int) 495 => 'Breast',
(int) 496 => 'Kidney',
(int) 497 => 'Ovary',
(int) 498 => 'Placenta',
(int) 499 => 'Adipose',
(int) 500 => 'Adrenal',
(int) 501 => 'Placenta',
(int) 502 => 'Adipose',
(int) 503 => 'Breast',
(int) 504 => 'Ovary',
(int) 505 => 'Placenta',
(int) 506 => 'Brain',
(int) 507 => 'Liver',
(int) 508 => 'Ovary',
(int) 509 => 'Placenta',
(int) 510 => 'Heart',
(int) 511 => 'Adipose',
(int) 512 => 'Adrenal',
(int) 513 => 'Bladder',
(int) 514 => 'Brain',
(int) 515 => 'Breast',
(int) 516 => 'Colon',
(int) 517 => 'Heart',
(int) 518 => 'Kidney',
(int) 519 => 'Liver',
(int) 520 => 'Lung',
(int) 521 => 'Muscle',
(int) 522 => 'Ovary',
(int) 523 => 'Placenta',
(int) 524 => 'Testis',
(int) 525 => 'Brain',
(int) 526 => 'Muscle',
(int) 527 => 'Colon',
(int) 528 => 'Liver',
(int) 529 => 'Ovary',
(int) 530 => 'Adrenal',
(int) 531 => 'Testis',
(int) 532 => 'Adipose',
(int) 533 => 'Adrenal',
(int) 534 => 'Breast',
(int) 535 => 'Colon',
(int) 536 => 'Heart',
(int) 537 => 'Kidney',
(int) 538 => 'Liver',
(int) 539 => 'Lung',
(int) 540 => 'Ovary',
(int) 541 => 'Bladder',
(int) 542 => 'Brain',
(int) 543 => 'Breast',
(int) 544 => 'Heart',
(int) 545 => 'Lung',
(int) 546 => 'Muscle',
(int) 547 => 'Ovary',
(int) 548 => 'Placenta',
(int) 549 => 'Testis',
(int) 550 => 'Adipose',
(int) 551 => 'Adrenal',
(int) 552 => 'Brain',
(int) 553 => 'Breast',
(int) 554 => 'Colon',
(int) 555 => 'Heart',
(int) 556 => 'Kidney',
(int) 557 => 'Liver',
(int) 558 => 'Lung',
(int) 559 => 'Ovary',
(int) 560 => 'Placenta',
(int) 561 => 'Testis',
(int) 562 => 'Lung'
)
)
)
$gene_desc_arr = array(
'ENSG00000103335' => 'piezo-type mechanosensitive ion channel component 1',
'ENSG00000129910' => 'cadherin 15, type 1, M-cadherin (myotubule)',
'ENSG00000129993' => 'core-binding factor, runt domain, alpha subunit 2; translocated to, 3',
'ENSG00000141012' => 'galactosamine (N-acetyl)-6-sulfatase',
'ENSG00000158717' => 'ring finger protein 166',
'ENSG00000167513' => 'chromatin licensing and DNA replication factor 1',
'ENSG00000167515' => 'trafficking protein particle complex 2-like',
'ENSG00000167522' => 'ankyrin repeat domain 11',
'ENSG00000170100' => 'zinc finger protein 778',
'ENSG00000174177' => 'cytosolic thiouridylase subunit 2 homolog (S. pombe)',
'ENSG00000176715' => 'acyl-CoA synthetase family member 3',
'ENSG00000180422' => 'long intergenic non-protein coding RNA 304',
'ENSG00000182376' => null,
'ENSG00000198931' => 'adenine phosphoribosyltransferase',
'ENSG00000205015' => null,
'ENSG00000205018' => null,
'ENSG00000205022' => 'poly(A) binding protein, nuclear 1-like (cytoplasmic)',
'ENSG00000224888' => null,
'ENSG00000256982' => null,
'ENSG00000259803' => 'solute carrier family 22, member 31',
'ENSG00000259813' => null,
'ENSG00000259877' => null,
'ENSG00000259881' => null,
'ENSG00000259989' => null,
'ENSG00000260121' => null,
'ENSG00000260617' => null,
'ENSG00000260659' => null,
'ENSG00000261226' => null,
'ENSG00000261546' => null,
'ENSG00000265672' => 'microRNA 4722',
'ENSG00000268218' => null,
'ENSG00000278341' => null,
'ENSMUSG00000006362' => 'core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)',
'ENSMUSG00000006517' => 'mevalonate (diphospho) decarboxylase',
'ENSMUSG00000006519' => 'cytochrome b-245, alpha polypeptide',
'ENSMUSG00000006585' => 'chromatin licensing and DNA replication factor 1',
'ENSMUSG00000006587' => 'snail family zinc finger 3',
'ENSMUSG00000006589' => 'adenine phosphoribosyl transferase',
'ENSMUSG00000014444' => 'piezo-type mechanosensitive ion channel component 1',
'ENSMUSG00000014470' => 'ring finger protein 166',
'ENSMUSG00000015013' => 'trafficking protein particle complex 2-like',
'ENSMUSG00000015016' => 'acyl-CoA synthetase family member 3',
'ENSMUSG00000015027' => 'galactosamine (N-acetyl)-6-sulfate sulfatase',
'ENSMUSG00000017478' => 'zinc finger CCCH-type containing 18',
'ENSMUSG00000031962' => 'cadherin 15',
'ENSMUSG00000035569' => 'ankyrin repeat domain 11',
'ENSMUSG00000046108' => 'interleukin 17C',
'ENSMUSG00000049482' => 'cytosolic thiouridylase subunit 2 homolog (S. pombe)',
'ENSMUSG00000065080' => 'predicted gene, 26497',
'ENSMUSG00000065915' => 'predicted gene, 24445',
'ENSMUSG00000069867' => 'poly(A)binding protein nuclear 1-like',
'ENSMUSG00000085917' => 'predicted gene 15899',
'ENSMUSG00000090174' => 'predicted gene 10612',
'ENSMUSG00000093124' => 'predicted gene, 24366',
'ENSMUSG00000095762' => 'predicted gene 16378',
'ENSMUSG00000098500' => 'microRNA 6396'
)
$gene_name_arr = array(
'ENSG00000103335' => 'PIEZO1',
'ENSG00000129910' => 'CDH15',
'ENSG00000129993' => 'CBFA2T3',
'ENSG00000141012' => 'GALNS',
'ENSG00000158717' => 'RNF166',
'ENSG00000167513' => 'CDT1',
'ENSG00000167515' => 'TRAPPC2L',
'ENSG00000167522' => 'ANKRD11',
'ENSG00000170100' => 'ZNF778',
'ENSG00000174177' => 'CTU2',
'ENSG00000176715' => 'ACSF3',
'ENSG00000180422' => 'LINC00304',
'ENSG00000182376' => 'RP5-1142A6.8',
'ENSG00000198931' => 'APRT',
'ENSG00000205015' => 'RP11-46C24.3',
'ENSG00000205018' => 'RP11-830F9.6',
'ENSG00000205022' => 'PABPN1L',
'ENSG00000224888' => 'RP5-1142A6.2',
'ENSG00000256982' => 'CTD-2555A7.2',
'ENSG00000259803' => 'SLC22A31',
'ENSG00000259813' => 'RP5-1142A6.5',
'ENSG00000259877' => 'RP11-46C24.7',
'ENSG00000259881' => 'RP11-830F9.5',
'ENSG00000259989' => 'CTD-2555A7.1',
'ENSG00000260121' => 'RP5-1142A6.9',
'ENSG00000260617' => 'RP5-1142A6.7',
'ENSG00000260659' => 'RP11-46C24.6',
'ENSG00000261226' => 'RP11-830F9.7',
'ENSG00000261546' => 'CTD-2555A7.3',
'ENSG00000265672' => 'MIR4722',
'ENSG00000268218' => 'AC137932.4',
'ENSG00000278341' => 'RP5-1142A6.10',
'ENSMUSG00000006362' => 'Cbfa2t3',
'ENSMUSG00000006517' => 'Mvd',
'ENSMUSG00000006519' => 'Cyba',
'ENSMUSG00000006585' => 'Cdt1',
'ENSMUSG00000006587' => 'Snai3',
'ENSMUSG00000006589' => 'Aprt',
'ENSMUSG00000014444' => 'Piezo1',
'ENSMUSG00000014470' => 'Rnf166',
'ENSMUSG00000015013' => 'Trappc2l',
'ENSMUSG00000015016' => 'Acsf3',
'ENSMUSG00000015027' => 'Galns',
'ENSMUSG00000017478' => 'Zc3h18',
'ENSMUSG00000031962' => 'Cdh15',
'ENSMUSG00000035569' => 'Ankrd11',
'ENSMUSG00000046108' => 'Il17c',
'ENSMUSG00000049482' => 'Ctu2',
'ENSMUSG00000065080' => 'Gm26497',
'ENSMUSG00000065915' => 'Gm24445',
'ENSMUSG00000069867' => 'Pabpn1l',
'ENSMUSG00000085917' => 'Gm15899',
'ENSMUSG00000090174' => 'Gm10612',
'ENSMUSG00000093124' => 'Gm24366',
'ENSMUSG00000095762' => 'Gm16378',
'ENSMUSG00000098500' => 'Mir6396'
)
$accession_table = array(
(int) 0 => array(
'region_elements' => array(
'region_element_id' => 'CIL_00091T_0001',
'tax_id' => '9606',
'chromosome' => '16',
'seq_start' => '88690989',
'seq_end' => '89294615',
'region_length' => '603626',
'region_type' => 'VISTA',
'el_id' => 'hs1854'
)
),
(int) 1 => array(
'region_elements' => array(
'region_element_id' => 'CIL_00091T_0002',
'tax_id' => '10090',
'chromosome' => '8',
'seq_start' => '122411841',
'seq_end' => '123013825',
'region_length' => '601984',
'region_type' => 'VISTA',
'el_id' => 'hs1854'
)
)
)
$all_tissues = array(
(int) 0 => 'Adipose',
(int) 27 => 'Adrenal',
(int) 61 => 'Bladder',
(int) 75 => 'Brain',
(int) 126 => 'Breast',
(int) 168 => 'Colon',
(int) 208 => 'Heart',
(int) 247 => 'Kidney',
(int) 296 => 'Liver',
(int) 345 => 'Lung',
(int) 389 => 'Muscle',
(int) 430 => 'Ovary',
(int) 484 => 'Placenta',
(int) 523 => 'Testis'
)
$column_titles = array(
(int) 0 => 'Region Sub-Accession',
(int) 1 => 'Tax ID',
(int) 2 => 'Position',
(int) 3 => 'Region Length'
)
$geneviewer = array(
(int) 9606 => array(
'version' => 'GRCh38',
'coord_key' => 'Homo sapiens',
'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCh38.2bit',
'bwgURI' => '/static/files/GRCh38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 10090 => array(
'version' => 'GRCm38',
'coord_key' => 'Mus musculus',
'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCm38.2bit',
'bwgURI' => '/static/files/GRCm38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 7955 => array(
'version' => 'Zv9',
'coord_key' => 'Danio rerio',
'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
'twoBitURI' => '/static/files/Zv9.2bit',
'bwgURI' => '/static/files/Zv9.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
)
)
$transcript_count = (int) 229
$longest_tissue_len = (int) 8
$transcript_data = array(
'ENST00000301015' => array(
'start' => '88715346',
'end' => '88785211',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-001'
),
'ENST00000327397' => array(
'start' => '88715491',
'end' => '88717611',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-201'
),
'ENST00000419505' => array(
'start' => '88715343',
'end' => '88719890',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'PIEZO1-003'
),
'ENST00000466823' => array(
'start' => '88717722',
'end' => '88720258',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-017'
),
'ENST00000472168' => array(
'start' => '88715816',
'end' => '88716792',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-013'
),
'ENST00000474606' => array(
'start' => '88722982',
'end' => '88726344',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-009'
),
'ENST00000475586' => array(
'start' => '88723947',
'end' => '88726025',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-008'
),
'ENST00000484567' => array(
'start' => '88715343',
'end' => '88718318',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-004'
),
'ENST00000490756' => array(
'start' => '88732464',
'end' => '88732980',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-006'
),
'ENST00000491917' => array(
'start' => '88727074',
'end' => '88727843',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-007'
),
'ENST00000495568' => array(
'start' => '88717023',
'end' => '88720473',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-010'
),
'ENST00000497793' => array(
'start' => '88718972',
'end' => '88720387',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-011'
),
'ENST00000518793' => array(
'start' => '88715343',
'end' => '88716277',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-015'
),
'ENST00000521877' => array(
'start' => '88715449',
'end' => '88716212',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-014'
),
'ENST00000566414' => array(
'start' => '88722523',
'end' => '88723934',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-016'
),
'ENST00000289746' => array(
'start' => '89171767',
'end' => '89195492',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CDH15-001'
),
'ENST00000521087' => array(
'start' => '89171767',
'end' => '89183605',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'CDH15-002'
),
'ENST00000524089' => array(
'start' => '89171767',
'end' => '89186192',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CDH15-003'
),
'ENST00000268679' => array(
'start' => '88874858',
'end' => '88977204',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-001'
),
'ENST00000327483' => array(
'start' => '88874858',
'end' => '88941198',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-002'
),
'ENST00000562719' => array(
'start' => '88892285',
'end' => '88902515',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-008'
),
'ENST00000563640' => array(
'start' => '88892399',
'end' => '88977080',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-009'
),
'ENST00000563856' => array(
'start' => '88875525',
'end' => '88881157',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CBFA2T3-004'
),
'ENST00000563920' => array(
'start' => '88876228',
'end' => '88880036',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CBFA2T3-005'
),
'ENST00000564416' => array(
'start' => '88898088',
'end' => '88941200',
'transcript_biotype' => 'protein_coding',
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'start' => '88809518',
'end' => '88811897',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'APRT-008'
),
'ENST00000378340' => array(
'start' => '89166383',
'end' => '89169147',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'RP11-46C24.3-001'
),
'ENST00000378347' => array(
'start' => '88939789',
'end' => '88951524',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-830F9.6-001'
),
'ENST00000411789' => array(
'start' => '88863686',
'end' => '88866660',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PABPN1L-003'
),
'ENST00000419291' => array(
'start' => '88863333',
'end' => '88866618',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PABPN1L-001'
),
'ENST00000547152' => array(
'start' => '88863686',
'end' => '88866660',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PABPN1L-002'
),
'ENST00000440406' => array(
'start' => '88731180',
'end' => '88739188',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP5-1142A6.2-001'
),
'ENST00000567968' => array(
'start' => '88736800',
'end' => '88741425',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP5-1142A6.2-003'
),
'ENST00000537498' => array(
'start' => '89046172',
'end' => '89052965',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'CTD-2555A7.2-001'
),
'ENST00000562855' => array(
'start' => '89195761',
'end' => '89201664',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'SLC22A31-006'
),
'ENST00000562916' => array(
'start' => '89196347',
'end' => '89198867',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'SLC22A31-004'
),
'ENST00000563595' => array(
'start' => '89196151',
'end' => '89198840',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'SLC22A31-003'
),
'ENST00000568161' => array(
'start' => '89199105',
'end' => '89200121',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'SLC22A31-002'
),
'ENST00000603735' => array(
'start' => '89199412',
'end' => '89200318',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'SLC22A31-001'
),
'ENST00000614943' => array(
'start' => '89195761',
'end' => '89200121',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'SLC22A31-201'
),
'ENST00000561699' => array(
'start' => '88696501',
'end' => '88698610',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP5-1142A6.5-001'
),
'ENST00000570267' => array(
'start' => '89215211',
'end' => '89217653',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-46C24.7-001'
),
'ENST00000562405' => array(
'start' => '88881038',
'end' => '88883919',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-830F9.5-001'
),
'ENST00000562574' => array(
'start' => '88881257',
'end' => '88883715',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-830F9.5-002'
),
'ENST00000565053' => array(
'start' => '88883272',
'end' => '88887136',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-830F9.5-004'
),
'ENST00000569249' => array(
'start' => '88881455',
'end' => '88883926',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-830F9.5-003'
),
'ENST00000562040' => array(
'start' => '88984032',
'end' => '88995369',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'CTD-2555A7.1-001'
),
'ENST00000564984' => array(
'start' => '88718615',
'end' => '88720459',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP5-1142A6.9-001'
),
'ENST00000566114' => array(
'start' => '88741631',
'end' => '88742367',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP5-1142A6.7-001'
),
'ENST00000563182' => array(
'start' => '89226807',
'end' => '89228692',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-46C24.6-001'
),
'ENST00000561980' => array(
'start' => '88936779',
'end' => '88937756',
'transcript_biotype' => 'sense_intronic',
'transcript_name' => 'RP11-830F9.7-002'
),
'ENST00000564646' => array(
'start' => '88936779',
'end' => '88939651',
'transcript_biotype' => 'sense_intronic',
'transcript_name' => 'RP11-830F9.7-001'
),
'ENST00000562782' => array(
'start' => '89113175',
'end' => '89115279',
'transcript_biotype' => 'antisense',
'transcript_name' => 'CTD-2555A7.3-001'
),
'ENST00000578292' => array(
'start' => '88716278',
'end' => '88716337',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'MIR4722-201'
),
'ENST00000602042' => array(
'start' => '89268104',
'end' => '89273044',
'transcript_biotype' => 'antisense',
'transcript_name' => 'AC137932.4-001'
),
'ENST00000616106' => array(
'start' => '88708956',
'end' => '88710437',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP5-1142A6.10-001'
),
'ENSMUST00000006525' => array(
'start' => '122629463',
'end' => '122678072',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cbfa2t3-003'
),
'ENSMUST00000064674' => array(
'start' => '122629938',
'end' => '122678175',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cbfa2t3-002'
),
'ENSMUST00000127984' => array(
'start' => '122628739',
'end' => '122699109',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cbfa2t3-001'
),
'ENSMUST00000134045' => array(
'start' => '122639014',
'end' => '122678694',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cbfa2t3-005'
),
'ENSMUST00000142535' => array(
'start' => '122639018',
'end' => '122646466',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Cbfa2t3-007'
),
'ENSMUST00000147374' => array(
'start' => '122643004',
'end' => '122678111',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Cbfa2t3-006'
),
'ENSMUST00000148630' => array(
'start' => '122650028',
'end' => '122698902',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Cbfa2t3-004'
),
'ENSMUST00000006692' => array(
'start' => '122433596',
'end' => '122443422',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Mvd-201'
),
'ENSMUST00000017604' => array(
'start' => '122424772',
'end' => '122432940',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cyba-201'
),
'ENSMUST00000006760' => array(
'start' => '122568015',
'end' => '122573128',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cdt1-201'
),
'ENSMUST00000006762' => array(
'start' => '122454206',
'end' => '122460692',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Snai3-201'
),
'ENSMUST00000006764' => array(
'start' => '122574637',
'end' => '122576907',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Aprt-201'
),
'ENSMUST00000067252' => array(
'start' => '122481698',
'end' => '122551329',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Piezo1-201'
),
'ENSMUST00000123671' => array(
'start' => '122481721',
'end' => '122484780',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-008'
),
'ENSMUST00000126553' => array(
'start' => '122483367',
'end' => '122483869',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-007'
),
'ENSMUST00000128383' => array(
'start' => '122481982',
'end' => '122499885',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Piezo1-001'
),
'ENSMUST00000134304' => array(
'start' => '122482041',
'end' => '122483000',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-006'
),
'ENSMUST00000148497' => array(
'start' => '122485924',
'end' => '122498204',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Piezo1-002'
),
'ENSMUST00000152596' => array(
'start' => '122484865',
'end' => '122485624',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-004'
),
'ENSMUST00000155803' => array(
'start' => '122482080',
'end' => '122482676',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-005'
),
'ENSMUST00000156333' => array(
'start' => '122481712',
'end' => '122499886',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Piezo1-003'
),
'ENSMUST00000014614' => array(
'start' => '122466147',
'end' => '122476064',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Rnf166-001'
),
'ENSMUST00000136356' => array(
'start' => '122466862',
'end' => '122468227',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Rnf166-003'
),
'ENSMUST00000148780' => array(
'start' => '122468009',
'end' => '122475688',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Rnf166-002'
),
'ENSMUST00000015157' => array(
'start' => '122611626',
'end' => '122615588',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Trappc2l-201'
),
'ENSMUST00000015160' => array(
'start' => '122775505',
'end' => '122817880',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Acsf3-201'
),
'ENSMUST00000015171' => array(
'start' => '122578238',
'end' => '122611487',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Galns-201'
),
'ENSMUST00000017622' => array(
'start' => '122376609',
'end' => '122417359',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-001'
),
'ENSMUST00000093073' => array(
'start' => '122376643',
'end' => '122417360',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-002'
),
'ENSMUST00000175798' => array(
'start' => '122408018',
'end' => '122410904',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Zc3h18-010'
),
'ENSMUST00000175819' => array(
'start' => '122403340',
'end' => '122411403',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-008'
),
'ENSMUST00000176629' => array(
'start' => '122376681',
'end' => '122417359',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-005'
),
'ENSMUST00000176699' => array(
'start' => '122376644',
'end' => '122383725',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-007'
),
'ENSMUST00000177049' => array(
'start' => '122411325',
'end' => '122416248',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-009'
),
'ENSMUST00000177123' => array(
'start' => '122407843',
'end' => '122417359',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Zc3h18-004'
),
'ENSMUST00000177195' => array(
'start' => '122403270',
'end' => '122406127',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Zc3h18-011'
),
'ENSMUST00000177386' => array(
'start' => '122376648',
'end' => '122389744',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Zc3h18-003'
),
'ENSMUST00000034443' => array(
'start' => '122848374',
'end' => '122867397',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cdh15-201'
),
'ENSMUST00000098333' => array(
'start' => '122884151',
'end' => '122915987',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ankrd11-201'
),
'ENSMUST00000098334' => array(
'start' => '122883337',
'end' => '122974793',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ankrd11-001'
),
'ENSMUST00000172906' => array(
'start' => '122883822',
'end' => '122974793',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Ankrd11-002'
),
'ENSMUST00000174833' => array(
'start' => '122906063',
'end' => '122974773',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ankrd11-003'
),
'ENSMUST00000050963' => array(
'start' => '122422020',
'end' => '122423639',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Il17c-001'
),
'ENSMUST00000116412' => array(
'start' => '122476143',
'end' => '122483092',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-001'
),
'ENSMUST00000128472' => array(
'start' => '122476693',
'end' => '122478245',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-005'
),
'ENSMUST00000131934' => array(
'start' => '122480922',
'end' => '122481740',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-009'
),
'ENSMUST00000134127' => array(
'start' => '122476220',
'end' => '122479343',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-007'
),
'ENSMUST00000136253' => array(
'start' => '122480957',
'end' => '122481744',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-008'
),
'ENSMUST00000146634' => array(
'start' => '122476213',
'end' => '122478213',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-006'
),
'ENSMUST00000149925' => array(
'start' => '122476243',
'end' => '122478948',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-004'
),
'ENSMUST00000151855' => array(
'start' => '122476209',
'end' => '122484138',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Ctu2-002'
),
'ENSMUST00000154099' => array(
'start' => '122476213',
'end' => '122481741',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-003'
),
'ENSMUST00000083146' => array(
'start' => '122520568',
'end' => '122520674',
'transcript_biotype' => 'snRNA',
'transcript_name' => 'Gm26497-201'
),
'ENSMUST00000083981' => array(
'start' => '122982837',
'end' => '122982943',
'transcript_biotype' => 'snRNA',
'transcript_name' => 'Gm24445-201'
),
'ENSMUST00000093059' => array(
'start' => '122619471',
'end' => '122622739',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Pabpn1l-001'
),
'ENSMUST00000128586' => array(
'start' => '122683602',
'end' => '122683839',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm15899-001'
),
'ENSMUST00000162198' => array(
'start' => '122697860',
'end' => '122700160',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Gm10612-001'
),
'ENSMUST00000175383' => array(
'start' => '122471627',
'end' => '122471712',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'Gm24366-201'
),
'ENSMUST00000179168' => array(
'start' => '122841731',
'end' => '122842072',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm16378-001'
),
'ENSMUST00000183603' => array(
'start' => '122622265',
'end' => '122622375',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'Mir6396-201'
)
)
$accession_map = array(
'ENST000' => '9606',
'ENSMUST' => '10090',
'ENSDART' => '7955',
'ENSG000' => '9606',
'ENSMUSG' => '10090',
'ENSDARG' => '7955'
)
$sci_name_map = array(
(int) 9606 => 'Homo_sapiens',
(int) 10090 => 'Mus_musculus',
(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
'CIL_00091T_0001' => array(
'genes_in_region' => array(
'ENSG00000103335' => array(
[maximum depth reached]
),
'ENSG00000129910' => array(
[maximum depth reached]
),
'ENSG00000129993' => array(
[maximum depth reached]
),
'ENSG00000141012' => array(
[maximum depth reached]
),
'ENSG00000158717' => array(
[maximum depth reached]
),
'ENSG00000167513' => array(
[maximum depth reached]
),
'ENSG00000167515' => array(
[maximum depth reached]
),
'ENSG00000167522' => array(
[maximum depth reached]
),
'ENSG00000170100' => array(
[maximum depth reached]
),
'ENSG00000180422' => array(
[maximum depth reached]
),
'ENSG00000182376' => array(
[maximum depth reached]
),
'ENSG00000198931' => array(
[maximum depth reached]
),
'ENSG00000205015' => array(
[maximum depth reached]
),
'ENSG00000205018' => array(
[maximum depth reached]
),
'ENSG00000205022' => array(
[maximum depth reached]
),
'ENSG00000256982' => array(
[maximum depth reached]
),
'ENSG00000259803' => array(
[maximum depth reached]
),
'ENSG00000259813' => array(
[maximum depth reached]
),
'ENSG00000259877' => array(
[maximum depth reached]
),
'ENSG00000259989' => array(
[maximum depth reached]
),
'ENSG00000260121' => array(
[maximum depth reached]
),
'ENSG00000261226' => array(
[maximum depth reached]
),
'ENSG00000265672' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Adipose',
(int) 1 => 'Adrenal',
(int) 2 => 'Brain',
(int) 3 => 'Breast',
(int) 4 => 'Colon',
(int) 5 => 'Heart',
(int) 6 => 'Kidney',
(int) 7 => 'Liver',
(int) 8 => 'Lung',
(int) 9 => 'Muscle',
(int) 10 => 'Ovary',
(int) 11 => 'Placenta',
(int) 12 => 'Testis',
(int) 13 => 'Colon',
(int) 14 => 'Kidney',
(int) 15 => 'Liver',
(int) 16 => 'Brain',
(int) 17 => 'Breast',
(int) 18 => 'Kidney',
(int) 19 => 'Liver',
(int) 20 => 'Lung',
(int) 21 => 'Breast',
(int) 22 => 'Lung',
(int) 23 => 'Muscle',
(int) 24 => 'Ovary',
(int) 25 => 'Testis',
(int) 26 => 'Muscle',
(int) 27 => 'Adrenal',
(int) 28 => 'Brain',
(int) 29 => 'Breast',
(int) 30 => 'Kidney',
(int) 31 => 'Liver',
(int) 32 => 'Lung',
(int) 33 => 'Muscle',
(int) 34 => 'Ovary',
(int) 35 => 'Placenta',
(int) 36 => 'Testis',
(int) 37 => 'Adrenal',
(int) 38 => 'Brain',
(int) 39 => 'Colon',
(int) 40 => 'Kidney',
(int) 41 => 'Lung',
(int) 42 => 'Ovary',
(int) 43 => 'Kidney',
(int) 44 => 'Liver',
(int) 45 => 'Colon',
(int) 46 => 'Adipose',
(int) 47 => 'Adrenal',
(int) 48 => 'Brain',
(int) 49 => 'Colon',
(int) 50 => 'Heart',
(int) 51 => 'Lung',
(int) 52 => 'Muscle',
(int) 53 => 'Ovary',
(int) 54 => 'Testis',
(int) 55 => 'Liver',
(int) 56 => 'Liver',
(int) 57 => 'Adipose',
(int) 58 => 'Adrenal',
(int) 59 => 'Bladder',
(int) 60 => 'Brain',
(int) 61 => 'Breast',
(int) 62 => 'Colon',
(int) 63 => 'Heart',
(int) 64 => 'Kidney',
(int) 65 => 'Liver',
(int) 66 => 'Lung',
(int) 67 => 'Muscle',
(int) 68 => 'Ovary',
(int) 69 => 'Placenta',
(int) 70 => 'Testis',
(int) 71 => 'Brain',
(int) 72 => 'Breast',
(int) 73 => 'Colon',
(int) 74 => 'Liver',
(int) 75 => 'Lung',
(int) 76 => 'Muscle',
(int) 77 => 'Ovary',
(int) 78 => 'Placenta',
(int) 79 => 'Testis',
(int) 80 => 'Ovary',
(int) 81 => 'Heart',
(int) 82 => 'Placenta',
(int) 83 => 'Adrenal',
(int) 84 => 'Bladder',
(int) 85 => 'Brain',
(int) 86 => 'Breast',
(int) 87 => 'Colon',
(int) 88 => 'Heart',
(int) 89 => 'Kidney',
(int) 90 => 'Liver',
(int) 91 => 'Lung',
(int) 92 => 'Muscle',
(int) 93 => 'Ovary',
(int) 94 => 'Placenta',
(int) 95 => 'Testis',
(int) 96 => 'Bladder',
(int) 97 => 'Colon',
(int) 98 => 'Kidney',
(int) 99 => 'Liver',
(int) 100 => 'Lung',
(int) 101 => 'Ovary',
(int) 102 => 'Lung',
(int) 103 => 'Kidney',
(int) 104 => 'Adipose',
(int) 105 => 'Adrenal',
(int) 106 => 'Breast',
(int) 107 => 'Colon',
(int) 108 => 'Heart',
(int) 109 => 'Kidney',
(int) 110 => 'Liver',
(int) 111 => 'Lung',
(int) 112 => 'Ovary',
(int) 113 => 'Testis',
(int) 114 => 'Liver',
(int) 115 => 'Ovary',
(int) 116 => 'Testis',
(int) 117 => 'Adipose',
(int) 118 => 'Brain',
(int) 119 => 'Breast',
(int) 120 => 'Heart',
(int) 121 => 'Kidney',
(int) 122 => 'Liver',
(int) 123 => 'Lung',
(int) 124 => 'Muscle',
(int) 125 => 'Ovary',
(int) 126 => 'Placenta',
(int) 127 => 'Testis',
(int) 128 => 'Adrenal',
(int) 129 => 'Brain',
(int) 130 => 'Colon',
(int) 131 => 'Ovary',
(int) 132 => 'Placenta',
(int) 133 => 'Testis',
(int) 134 => 'Adipose',
(int) 135 => 'Adrenal',
(int) 136 => 'Brain',
(int) 137 => 'Heart',
(int) 138 => 'Kidney',
(int) 139 => 'Lung',
(int) 140 => 'Ovary',
(int) 141 => 'Placenta',
(int) 142 => 'Kidney',
(int) 143 => 'Brain',
(int) 144 => 'Breast',
(int) 145 => 'Kidney',
(int) 146 => 'Muscle',
(int) 147 => 'Ovary',
(int) 148 => 'Breast',
(int) 149 => 'Bladder',
(int) 150 => 'Heart',
(int) 151 => 'Ovary',
(int) 152 => 'Brain',
(int) 153 => 'Breast',
(int) 154 => 'Colon',
(int) 155 => 'Kidney',
(int) 156 => 'Liver',
(int) 157 => 'Lung',
(int) 158 => 'Muscle',
(int) 159 => 'Adipose',
(int) 160 => 'Adrenal',
(int) 161 => 'Brain',
(int) 162 => 'Breast',
(int) 163 => 'Colon',
(int) 164 => 'Heart',
(int) 165 => 'Kidney',
(int) 166 => 'Liver',
(int) 167 => 'Lung',
(int) 168 => 'Muscle',
(int) 169 => 'Ovary',
(int) 170 => 'Placenta',
(int) 171 => 'Testis',
(int) 172 => 'Breast',
(int) 173 => 'Colon',
(int) 174 => 'Placenta',
(int) 175 => 'Brain',
(int) 176 => 'Liver',
(int) 177 => 'Lung',
(int) 178 => 'Adipose',
(int) 179 => 'Adrenal',
(int) 180 => 'Brain',
(int) 181 => 'Breast',
(int) 182 => 'Colon',
(int) 183 => 'Heart',
(int) 184 => 'Kidney',
(int) 185 => 'Muscle',
(int) 186 => 'Ovary',
(int) 187 => 'Placenta',
(int) 188 => 'Testis',
(int) 189 => 'Adrenal',
(int) 190 => 'Brain',
(int) 191 => 'Breast',
(int) 192 => 'Colon',
(int) 193 => 'Heart',
(int) 194 => 'Lung',
(int) 195 => 'Muscle',
(int) 196 => 'Ovary',
(int) 197 => 'Brain',
(int) 198 => 'Heart',
(int) 199 => 'Muscle',
(int) 200 => 'Lung',
(int) 201 => 'Muscle',
(int) 202 => 'Colon',
(int) 203 => 'Liver',
(int) 204 => 'Adipose',
(int) 205 => 'Adrenal',
(int) 206 => 'Brain',
(int) 207 => 'Breast',
(int) 208 => 'Colon',
(int) 209 => 'Heart',
(int) 210 => 'Kidney',
(int) 211 => 'Muscle',
(int) 212 => 'Ovary',
(int) 213 => 'Testis',
(int) 214 => 'Kidney',
(int) 215 => 'Muscle',
(int) 216 => 'Adipose',
(int) 217 => 'Brain',
(int) 218 => 'Breast',
(int) 219 => 'Colon',
(int) 220 => 'Heart',
(int) 221 => 'Kidney',
(int) 222 => 'Liver',
(int) 223 => 'Muscle',
(int) 224 => 'Ovary',
(int) 225 => 'Placenta',
(int) 226 => 'Adipose',
(int) 227 => 'Adrenal',
(int) 228 => 'Brain',
(int) 229 => 'Breast',
(int) 230 => 'Colon',
(int) 231 => 'Heart',
(int) 232 => 'Kidney',
(int) 233 => 'Liver',
(int) 234 => 'Lung',
(int) 235 => 'Muscle',
(int) 236 => 'Ovary',
(int) 237 => 'Placenta',
(int) 238 => 'Testis',
(int) 239 => 'Bladder',
(int) 240 => 'Brain',
(int) 241 => 'Testis',
(int) 242 => 'Liver',
(int) 243 => 'Placenta',
(int) 244 => 'Testis',
(int) 245 => 'Adrenal',
(int) 246 => 'Brain',
(int) 247 => 'Breast',
(int) 248 => 'Heart',
(int) 249 => 'Kidney',
(int) 250 => 'Liver',
(int) 251 => 'Lung',
(int) 252 => 'Ovary',
(int) 253 => 'Kidney',
(int) 254 => 'Brain',
(int) 255 => 'Breast',
(int) 256 => 'Colon',
(int) 257 => 'Heart',
(int) 258 => 'Kidney',
(int) 259 => 'Liver',
(int) 260 => 'Lung',
(int) 261 => 'Muscle',
(int) 262 => 'Ovary',
(int) 263 => 'Bladder',
(int) 264 => 'Breast',
(int) 265 => 'Heart',
(int) 266 => 'Liver',
(int) 267 => 'Lung',
(int) 268 => 'Placenta',
(int) 269 => 'Adipose',
(int) 270 => 'Bladder',
(int) 271 => 'Brain',
(int) 272 => 'Breast',
(int) 273 => 'Colon',
(int) 274 => 'Heart',
(int) 275 => 'Liver',
(int) 276 => 'Lung',
(int) 277 => 'Ovary',
(int) 278 => 'Placenta',
(int) 279 => 'Testis',
(int) 280 => 'Brain',
(int) 281 => 'Breast',
(int) 282 => 'Colon',
(int) 283 => 'Kidney',
(int) 284 => 'Liver',
(int) 285 => 'Muscle',
(int) 286 => 'Brain',
(int) 287 => 'Heart',
(int) 288 => 'Kidney',
(int) 289 => 'Liver',
(int) 290 => 'Muscle',
(int) 291 => 'Brain',
(int) 292 => 'Breast',
(int) 293 => 'Colon',
(int) 294 => 'Heart',
(int) 295 => 'Kidney',
(int) 296 => 'Liver',
(int) 297 => 'Ovary',
(int) 298 => 'Placenta',
(int) 299 => 'Testis',
(int) 300 => 'Brain',
(int) 301 => 'Liver',
(int) 302 => 'Muscle',
(int) 303 => 'Testis',
(int) 304 => 'Brain',
(int) 305 => 'Muscle',
(int) 306 => 'Testis',
(int) 307 => 'Muscle',
(int) 308 => 'Adipose',
(int) 309 => 'Colon',
(int) 310 => 'Kidney',
(int) 311 => 'Liver',
(int) 312 => 'Lung',
(int) 313 => 'Muscle',
(int) 314 => 'Testis',
(int) 315 => 'Adipose',
(int) 316 => 'Adrenal',
(int) 317 => 'Bladder',
(int) 318 => 'Brain',
(int) 319 => 'Breast',
(int) 320 => 'Colon',
(int) 321 => 'Heart',
(int) 322 => 'Kidney',
(int) 323 => 'Liver',
(int) 324 => 'Lung',
(int) 325 => 'Muscle',
(int) 326 => 'Ovary',
(int) 327 => 'Placenta',
(int) 328 => 'Testis',
(int) 329 => 'Adipose',
(int) 330 => 'Bladder',
(int) 331 => 'Brain',
(int) 332 => 'Breast',
(int) 333 => 'Heart',
(int) 334 => 'Kidney',
(int) 335 => 'Liver',
(int) 336 => 'Lung',
(int) 337 => 'Ovary',
(int) 338 => 'Placenta',
(int) 339 => 'Muscle',
(int) 340 => 'Heart',
(int) 341 => 'Kidney',
(int) 342 => 'Muscle',
(int) 343 => 'Ovary',
(int) 344 => 'Placenta',
(int) 345 => 'Heart',
(int) 346 => 'Brain',
(int) 347 => 'Kidney',
(int) 348 => 'Muscle',
(int) 349 => 'Muscle',
(int) 350 => 'Ovary',
(int) 351 => 'Adipose',
(int) 352 => 'Adrenal',
(int) 353 => 'Brain',
(int) 354 => 'Breast',
(int) 355 => 'Heart',
(int) 356 => 'Kidney',
(int) 357 => 'Lung',
(int) 358 => 'Muscle',
(int) 359 => 'Ovary',
(int) 360 => 'Placenta',
(int) 361 => 'Testis',
(int) 362 => 'Brain',
(int) 363 => 'Bladder',
(int) 364 => 'Ovary',
(int) 365 => 'Adrenal',
(int) 366 => 'Brain',
(int) 367 => 'Kidney',
(int) 368 => 'Lung',
(int) 369 => 'Ovary',
(int) 370 => 'Liver',
(int) 371 => 'Ovary',
(int) 372 => 'Testis',
(int) 373 => 'Adipose',
(int) 374 => 'Adrenal',
(int) 375 => 'Brain',
(int) 376 => 'Breast',
(int) 377 => 'Colon',
(int) 378 => 'Kidney',
(int) 379 => 'Liver',
(int) 380 => 'Lung',
(int) 381 => 'Ovary',
(int) 382 => 'Placenta',
(int) 383 => 'Testis',
(int) 384 => 'Adipose',
(int) 385 => 'Adrenal',
(int) 386 => 'Brain',
(int) 387 => 'Breast',
(int) 388 => 'Colon',
(int) 389 => 'Heart',
(int) 390 => 'Kidney',
(int) 391 => 'Liver',
(int) 392 => 'Lung',
(int) 393 => 'Muscle',
(int) 394 => 'Ovary',
(int) 395 => 'Placenta',
(int) 396 => 'Testis',
(int) 397 => 'Adrenal',
(int) 398 => 'Bladder',
(int) 399 => 'Breast',
(int) 400 => 'Colon',
(int) 401 => 'Kidney',
(int) 402 => 'Liver',
(int) 403 => 'Ovary',
(int) 404 => 'Placenta',
(int) 405 => 'Testis',
(int) 406 => 'Bladder',
(int) 407 => 'Brain',
(int) 408 => 'Colon',
(int) 409 => 'Heart',
(int) 410 => 'Kidney',
(int) 411 => 'Liver',
(int) 412 => 'Lung',
(int) 413 => 'Muscle',
(int) 414 => 'Ovary',
(int) 415 => 'Placenta',
(int) 416 => 'Testis',
(int) 417 => 'Adipose',
(int) 418 => 'Adrenal',
(int) 419 => 'Brain',
(int) 420 => 'Breast',
(int) 421 => 'Colon',
(int) 422 => 'Heart',
(int) 423 => 'Kidney',
(int) 424 => 'Liver',
(int) 425 => 'Lung',
(int) 426 => 'Muscle',
(int) 427 => 'Ovary',
(int) 428 => 'Placenta',
(int) 429 => 'Testis',
(int) 430 => 'Liver',
(int) 431 => 'Ovary',
(int) 432 => 'Placenta',
(int) 433 => 'Testis',
(int) 434 => 'Adrenal',
(int) 435 => 'Brain',
(int) 436 => 'Breast',
(int) 437 => 'Colon',
(int) 438 => 'Heart',
(int) 439 => 'Kidney',
(int) 440 => 'Liver',
(int) 441 => 'Lung',
(int) 442 => 'Testis',
(int) 443 => 'Liver',
(int) 444 => 'Adipose',
(int) 445 => 'Adrenal',
(int) 446 => 'Brain',
(int) 447 => 'Muscle',
(int) 448 => 'Ovary',
(int) 449 => 'Brain',
(int) 450 => 'Adrenal',
(int) 451 => 'Breast',
(int) 452 => 'Adipose',
(int) 453 => 'Breast',
(int) 454 => 'Colon',
(int) 455 => 'Heart',
(int) 456 => 'Kidney',
(int) 457 => 'Liver',
(int) 458 => 'Lung',
(int) 459 => 'Muscle',
(int) 460 => 'Placenta',
(int) 461 => 'Testis',
(int) 462 => 'Kidney',
(int) 463 => 'Lung',
(int) 464 => 'Placenta',
(int) 465 => 'Testis',
(int) 466 => 'Adipose',
(int) 467 => 'Adrenal',
(int) 468 => 'Brain',
(int) 469 => 'Breast',
(int) 470 => 'Colon',
(int) 471 => 'Heart',
(int) 472 => 'Kidney',
(int) 473 => 'Liver',
(int) 474 => 'Lung',
(int) 475 => 'Ovary',
(int) 476 => 'Placenta',
(int) 477 => 'Testis',
(int) 478 => 'Ovary',
(int) 479 => 'Adrenal',
(int) 480 => 'Brain',
(int) 481 => 'Heart',
(int) 482 => 'Ovary',
(int) 483 => 'Testis',
(int) 484 => 'Liver',
(int) 485 => 'Adrenal',
(int) 486 => 'Brain',
(int) 487 => 'Colon',
(int) 488 => 'Lung',
(int) 489 => 'Adrenal',
(int) 490 => 'Colon',
(int) 491 => 'Kidney',
(int) 492 => 'Lung',
(int) 493 => 'Ovary',
(int) 494 => 'Placenta',
(int) 495 => 'Breast',
(int) 496 => 'Kidney',
(int) 497 => 'Ovary',
(int) 498 => 'Placenta',
(int) 499 => 'Adipose',
(int) 500 => 'Adrenal',
(int) 501 => 'Placenta',
(int) 502 => 'Adipose',
(int) 503 => 'Breast',
(int) 504 => 'Ovary',
(int) 505 => 'Placenta',
(int) 506 => 'Brain',
(int) 507 => 'Liver',
(int) 508 => 'Ovary',
(int) 509 => 'Placenta',
(int) 510 => 'Heart',
(int) 511 => 'Adipose',
(int) 512 => 'Adrenal',
(int) 513 => 'Bladder',
(int) 514 => 'Brain',
(int) 515 => 'Breast',
(int) 516 => 'Colon',
(int) 517 => 'Heart',
(int) 518 => 'Kidney',
(int) 519 => 'Liver',
(int) 520 => 'Lung',
(int) 521 => 'Muscle',
(int) 522 => 'Ovary',
(int) 523 => 'Placenta',
(int) 524 => 'Testis',
(int) 525 => 'Brain',
(int) 526 => 'Muscle',
(int) 527 => 'Colon',
(int) 528 => 'Liver',
(int) 529 => 'Ovary',
(int) 530 => 'Adrenal',
(int) 531 => 'Testis',
(int) 532 => 'Adipose',
(int) 533 => 'Adrenal',
(int) 534 => 'Breast',
(int) 535 => 'Colon',
(int) 536 => 'Heart',
(int) 537 => 'Kidney',
(int) 538 => 'Liver',
(int) 539 => 'Lung',
(int) 540 => 'Ovary',
(int) 541 => 'Bladder',
(int) 542 => 'Brain',
(int) 543 => 'Breast',
(int) 544 => 'Heart',
(int) 545 => 'Lung',
(int) 546 => 'Muscle',
(int) 547 => 'Ovary',
(int) 548 => 'Placenta',
(int) 549 => 'Testis',
(int) 550 => 'Adipose',
(int) 551 => 'Adrenal',
(int) 552 => 'Brain',
(int) 553 => 'Breast',
(int) 554 => 'Colon',
(int) 555 => 'Heart',
(int) 556 => 'Kidney',
(int) 557 => 'Liver',
(int) 558 => 'Lung',
(int) 559 => 'Ovary',
(int) 560 => 'Placenta',
(int) 561 => 'Testis',
(int) 562 => 'Lung'
)
)
)
$accession = array(
'region_elements' => array(
'region_element_id' => 'CIL_00091T_0002',
'tax_id' => '10090',
'chromosome' => '8',
'seq_start' => '122411841',
'seq_end' => '123013825',
'region_length' => '601984',
'region_type' => 'VISTA',
'el_id' => 'hs1854'
)
)
$gene_el = array(
'ENST00000578292' => array(
'Lung' => array(
'average_FPKM' => '0.909',
'stddev_FPKM' => '0.00'
)
)
)
$gene_key = 'ENSG00000265672'
$is_first = false
$tran_el = array(
'Lung' => array(
'average_FPKM' => '0.909',
'stddev_FPKM' => '0.00'
)
)
$tran_key = 'ENST00000578292'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108
Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]Code Context
<tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
<?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
'region_arr' => array(
'CIL_00091T_0001' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
)
),
'gene_desc_arr' => array(
'ENSG00000103335' => 'piezo-type mechanosensitive ion channel component 1',
'ENSG00000129910' => 'cadherin 15, type 1, M-cadherin (myotubule)',
'ENSG00000129993' => 'core-binding factor, runt domain, alpha subunit 2; translocated to, 3',
'ENSG00000141012' => 'galactosamine (N-acetyl)-6-sulfatase',
'ENSG00000158717' => 'ring finger protein 166',
'ENSG00000167513' => 'chromatin licensing and DNA replication factor 1',
'ENSG00000167515' => 'trafficking protein particle complex 2-like',
'ENSG00000167522' => 'ankyrin repeat domain 11',
'ENSG00000170100' => 'zinc finger protein 778',
'ENSG00000174177' => 'cytosolic thiouridylase subunit 2 homolog (S. pombe)',
'ENSG00000176715' => 'acyl-CoA synthetase family member 3',
'ENSG00000180422' => 'long intergenic non-protein coding RNA 304',
'ENSG00000182376' => null,
'ENSG00000198931' => 'adenine phosphoribosyltransferase',
'ENSG00000205015' => null,
'ENSG00000205018' => null,
'ENSG00000205022' => 'poly(A) binding protein, nuclear 1-like (cytoplasmic)',
'ENSG00000224888' => null,
'ENSG00000256982' => null,
'ENSG00000259803' => 'solute carrier family 22, member 31',
'ENSG00000259813' => null,
'ENSG00000259877' => null,
'ENSG00000259881' => null,
'ENSG00000259989' => null,
'ENSG00000260121' => null,
'ENSG00000260617' => null,
'ENSG00000260659' => null,
'ENSG00000261226' => null,
'ENSG00000261546' => null,
'ENSG00000265672' => 'microRNA 4722',
'ENSG00000268218' => null,
'ENSG00000278341' => null,
'ENSMUSG00000006362' => 'core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)',
'ENSMUSG00000006517' => 'mevalonate (diphospho) decarboxylase',
'ENSMUSG00000006519' => 'cytochrome b-245, alpha polypeptide',
'ENSMUSG00000006585' => 'chromatin licensing and DNA replication factor 1',
'ENSMUSG00000006587' => 'snail family zinc finger 3',
'ENSMUSG00000006589' => 'adenine phosphoribosyl transferase',
'ENSMUSG00000014444' => 'piezo-type mechanosensitive ion channel component 1',
'ENSMUSG00000014470' => 'ring finger protein 166',
'ENSMUSG00000015013' => 'trafficking protein particle complex 2-like',
'ENSMUSG00000015016' => 'acyl-CoA synthetase family member 3',
'ENSMUSG00000015027' => 'galactosamine (N-acetyl)-6-sulfate sulfatase',
'ENSMUSG00000017478' => 'zinc finger CCCH-type containing 18',
'ENSMUSG00000031962' => 'cadherin 15',
'ENSMUSG00000035569' => 'ankyrin repeat domain 11',
'ENSMUSG00000046108' => 'interleukin 17C',
'ENSMUSG00000049482' => 'cytosolic thiouridylase subunit 2 homolog (S. pombe)',
'ENSMUSG00000065080' => 'predicted gene, 26497',
'ENSMUSG00000065915' => 'predicted gene, 24445',
'ENSMUSG00000069867' => 'poly(A)binding protein nuclear 1-like',
'ENSMUSG00000085917' => 'predicted gene 15899',
'ENSMUSG00000090174' => 'predicted gene 10612',
'ENSMUSG00000093124' => 'predicted gene, 24366',
'ENSMUSG00000095762' => 'predicted gene 16378',
'ENSMUSG00000098500' => 'microRNA 6396'
),
'gene_name_arr' => array(
'ENSG00000103335' => 'PIEZO1',
'ENSG00000129910' => 'CDH15',
'ENSG00000129993' => 'CBFA2T3',
'ENSG00000141012' => 'GALNS',
'ENSG00000158717' => 'RNF166',
'ENSG00000167513' => 'CDT1',
'ENSG00000167515' => 'TRAPPC2L',
'ENSG00000167522' => 'ANKRD11',
'ENSG00000170100' => 'ZNF778',
'ENSG00000174177' => 'CTU2',
'ENSG00000176715' => 'ACSF3',
'ENSG00000180422' => 'LINC00304',
'ENSG00000182376' => 'RP5-1142A6.8',
'ENSG00000198931' => 'APRT',
'ENSG00000205015' => 'RP11-46C24.3',
'ENSG00000205018' => 'RP11-830F9.6',
'ENSG00000205022' => 'PABPN1L',
'ENSG00000224888' => 'RP5-1142A6.2',
'ENSG00000256982' => 'CTD-2555A7.2',
'ENSG00000259803' => 'SLC22A31',
'ENSG00000259813' => 'RP5-1142A6.5',
'ENSG00000259877' => 'RP11-46C24.7',
'ENSG00000259881' => 'RP11-830F9.5',
'ENSG00000259989' => 'CTD-2555A7.1',
'ENSG00000260121' => 'RP5-1142A6.9',
'ENSG00000260617' => 'RP5-1142A6.7',
'ENSG00000260659' => 'RP11-46C24.6',
'ENSG00000261226' => 'RP11-830F9.7',
'ENSG00000261546' => 'CTD-2555A7.3',
'ENSG00000265672' => 'MIR4722',
'ENSG00000268218' => 'AC137932.4',
'ENSG00000278341' => 'RP5-1142A6.10',
'ENSMUSG00000006362' => 'Cbfa2t3',
'ENSMUSG00000006517' => 'Mvd',
'ENSMUSG00000006519' => 'Cyba',
'ENSMUSG00000006585' => 'Cdt1',
'ENSMUSG00000006587' => 'Snai3',
'ENSMUSG00000006589' => 'Aprt',
'ENSMUSG00000014444' => 'Piezo1',
'ENSMUSG00000014470' => 'Rnf166',
'ENSMUSG00000015013' => 'Trappc2l',
'ENSMUSG00000015016' => 'Acsf3',
'ENSMUSG00000015027' => 'Galns',
'ENSMUSG00000017478' => 'Zc3h18',
'ENSMUSG00000031962' => 'Cdh15',
'ENSMUSG00000035569' => 'Ankrd11',
'ENSMUSG00000046108' => 'Il17c',
'ENSMUSG00000049482' => 'Ctu2',
'ENSMUSG00000065080' => 'Gm26497',
'ENSMUSG00000065915' => 'Gm24445',
'ENSMUSG00000069867' => 'Pabpn1l',
'ENSMUSG00000085917' => 'Gm15899',
'ENSMUSG00000090174' => 'Gm10612',
'ENSMUSG00000093124' => 'Gm24366',
'ENSMUSG00000095762' => 'Gm16378',
'ENSMUSG00000098500' => 'Mir6396'
),
'accession_table' => array(
(int) 0 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 1 => array(
'region_elements' => array(
[maximum depth reached]
)
)
),
'all_tissues' => array(
(int) 0 => 'Adipose',
(int) 27 => 'Adrenal',
(int) 61 => 'Bladder',
(int) 75 => 'Brain',
(int) 126 => 'Breast',
(int) 168 => 'Colon',
(int) 208 => 'Heart',
(int) 247 => 'Kidney',
(int) 296 => 'Liver',
(int) 345 => 'Lung',
(int) 389 => 'Muscle',
(int) 430 => 'Ovary',
(int) 484 => 'Placenta',
(int) 523 => 'Testis'
),
'column_titles' => array(
(int) 0 => 'Region Sub-Accession',
(int) 1 => 'Tax ID',
(int) 2 => 'Position',
(int) 3 => 'Region Length'
),
'geneviewer' => array(
(int) 9606 => array(
'version' => 'GRCh38',
'coord_key' => 'Homo sapiens',
'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCh38.2bit',
'bwgURI' => '/static/files/GRCh38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 10090 => array(
'version' => 'GRCm38',
'coord_key' => 'Mus musculus',
'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCm38.2bit',
'bwgURI' => '/static/files/GRCm38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 7955 => array(
'version' => 'Zv9',
'coord_key' => 'Danio rerio',
'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
'twoBitURI' => '/static/files/Zv9.2bit',
'bwgURI' => '/static/files/Zv9.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
)
),
'transcript_count' => (int) 229,
'longest_tissue_len' => (int) 8,
'transcript_data' => array(
'ENST00000301015' => array(
'start' => '88715346',
'end' => '88785211',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-001'
),
'ENST00000327397' => array(
'start' => '88715491',
'end' => '88717611',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-201'
),
'ENST00000419505' => array(
'start' => '88715343',
'end' => '88719890',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'PIEZO1-003'
),
'ENST00000466823' => array(
'start' => '88717722',
'end' => '88720258',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-017'
),
'ENST00000472168' => array(
'start' => '88715816',
'end' => '88716792',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-013'
),
'ENST00000474606' => array(
'start' => '88722982',
'end' => '88726344',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-009'
),
'ENST00000475586' => array(
'start' => '88723947',
'end' => '88726025',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-008'
),
'ENST00000484567' => array(
'start' => '88715343',
'end' => '88718318',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-004'
),
'ENST00000490756' => array(
'start' => '88732464',
'end' => '88732980',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-006'
),
'ENST00000491917' => array(
'start' => '88727074',
'end' => '88727843',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-007'
),
'ENST00000495568' => array(
'start' => '88717023',
'end' => '88720473',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-010'
),
'ENST00000497793' => array(
'start' => '88718972',
'end' => '88720387',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-011'
),
'ENST00000518793' => array(
'start' => '88715343',
'end' => '88716277',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-015'
),
'ENST00000521877' => array(
'start' => '88715449',
'end' => '88716212',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-014'
),
'ENST00000566414' => array(
'start' => '88722523',
'end' => '88723934',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-016'
),
'ENST00000289746' => array(
'start' => '89171767',
'end' => '89195492',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CDH15-001'
),
'ENST00000521087' => array(
'start' => '89171767',
'end' => '89183605',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'CDH15-002'
),
'ENST00000524089' => array(
'start' => '89171767',
'end' => '89186192',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CDH15-003'
),
'ENST00000268679' => array(
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'end' => '88977204',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-001'
),
'ENST00000327483' => array(
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'end' => '88941198',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-002'
),
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'end' => '88902515',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-008'
),
'ENST00000563640' => array(
'start' => '88892399',
'end' => '88977080',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-009'
),
'ENST00000563856' => array(
'start' => '88875525',
'end' => '88881157',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CBFA2T3-004'
),
'ENST00000563920' => array(
'start' => '88876228',
'end' => '88880036',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CBFA2T3-005'
),
'ENST00000564416' => array(
'start' => '88898088',
'end' => '88941200',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-011'
),
'ENST00000566868' => array(
'start' => '88879430',
'end' => '88881313',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'CBFA2T3-007'
),
'ENST00000569443' => array(
'start' => '88892244',
'end' => '88941844',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-010'
),
'ENST00000569464' => array(
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'end' => '88941809',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-006'
),
'ENST00000570046' => array(
'start' => '88901558',
'end' => '88957775',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-012'
),
'ENST00000268695' => array(
'start' => '88813734',
'end' => '88856966',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'GALNS-001'
),
'ENST00000561812' => array(
'start' => '88836241',
'end' => '88838922',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'GALNS-010'
),
'ENST00000562593' => array(
'start' => '88813735',
'end' => '88845624',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'GALNS-004'
),
'ENST00000562831' => array(
'start' => '88835755',
'end' => '88856575',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'GALNS-009'
),
'ENST00000562931' => array(
'start' => '88832034',
'end' => '88837849',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'GALNS-012'
),
'ENST00000564263' => array(
'start' => '88824789',
'end' => '88827116',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'GALNS-013'
),
'ENST00000565364' => array(
'start' => '88840335',
'end' => '88856842',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'GALNS-003'
),
'ENST00000566563' => array(
'start' => '88835729',
'end' => '88837889',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'GALNS-011'
),
'ENST00000567525' => array(
'start' => '88813736',
'end' => '88856826',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'GALNS-006'
),
'ENST00000567779' => array(
'start' => '88840698',
'end' => '88842045',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'GALNS-007'
),
'ENST00000568311' => array(
'start' => '88855128',
'end' => '88856970',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'GALNS-002'
),
'ENST00000568613' => array(
'start' => '88814323',
'end' => '88856826',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'GALNS-005'
),
'ENST00000569433' => array(
'start' => '88855753',
'end' => '88856931',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'GALNS-008'
),
'ENST00000312838' => array(
'start' => '88696495',
'end' => '88706421',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-001'
),
'ENST00000537718' => array(
'start' => '88696502',
'end' => '88700603',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-007'
),
'ENST00000541206' => array(
'start' => '88696536',
'end' => '88703617',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-002'
),
'ENST00000562499' => array(
'start' => '88701297',
'end' => '88703602',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'RNF166-004'
),
'ENST00000562544' => array(
'start' => '88696499',
'end' => '88706262',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-011'
),
'ENST00000564894' => array(
'start' => '88700756',
'end' => '88701650',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'RNF166-006'
),
'ENST00000565083' => array(
'start' => '88697296',
'end' => '88698183',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'RNF166-010'
),
'ENST00000567408' => array(
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'end' => '88699706',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-012'
),
'ENST00000567844' => array(
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'end' => '88706398',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-003'
),
'ENST00000568683' => array(
'start' => '88697394',
'end' => '88700056',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-009'
),
'ENST00000569478' => array(
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'end' => '88703241',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'RNF166-005'
),
'ENST00000301019' => array(
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'end' => '88809258',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CDT1-001'
),
'ENST00000562747' => array(
'start' => '88804611',
'end' => '88806217',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CDT1-003'
),
'ENST00000569140' => array(
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'end' => '88807342',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CDT1-002'
),
'ENST00000301021' => array(
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'end' => '88862686',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TRAPPC2L-001'
),
'ENST00000561840' => array(
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'end' => '88861049',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TRAPPC2L-011'
),
'ENST00000562125' => array(
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'end' => '88861105',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'TRAPPC2L-006'
),
'ENST00000562792' => array(
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'end' => '88859729',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'TRAPPC2L-012'
),
'ENST00000563514' => array(
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'transcript_biotype' => 'retained_intron',
'transcript_name' => 'TRAPPC2L-014'
),
'ENST00000564365' => array(
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'end' => '88861415',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TRAPPC2L-003'
),
'ENST00000564404' => array(
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'end' => '88861110',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'TRAPPC2L-007'
),
'ENST00000564547' => array(
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'transcript_biotype' => 'retained_intron',
'transcript_name' => 'TRAPPC2L-013'
),
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'end' => '88861287',
'transcript_biotype' => 'nonsense_mediated_decay',
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),
'ENST00000565309' => array(
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'end' => '88860186',
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),
'ENST00000565504' => array(
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'transcript_biotype' => 'protein_coding',
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),
'ENST00000567312' => array(
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'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TRAPPC2L-004'
),
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'end' => '88861351',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TRAPPC2L-010'
),
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'transcript_biotype' => 'protein_coding',
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),
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),
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),
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),
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),
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),
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),
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'transcript_biotype' => 'processed_transcript',
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),
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'transcript_name' => 'ANKRD11-009'
),
'ENST00000564553' => array(
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),
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),
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),
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),
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'end' => '89286481',
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),
'ENST00000568512' => array(
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'end' => '89490293',
'transcript_biotype' => 'processed_transcript',
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),
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'end' => '89313585',
'transcript_biotype' => 'processed_transcript',
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),
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'transcript_name' => 'ANKRD11-201'
),
'ENST00000623388' => array(
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'end' => '89279716',
'transcript_biotype' => 'TEC',
'transcript_name' => 'ANKRD11-013'
),
'ENST00000306502' => array(
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'end' => '89228714',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'ZNF778-004'
),
'ENST00000433976' => array(
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'end' => '89229557',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'ZNF778-201'
),
'ENST00000564906' => array(
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'end' => '89223282',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'ZNF778-007'
),
'ENST00000565414' => array(
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'end' => '89226778',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'ZNF778-005'
),
'ENST00000565877' => array(
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'end' => '122406127',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Zc3h18-011'
),
'ENSMUST00000177386' => array(
'start' => '122376648',
'end' => '122389744',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Zc3h18-003'
),
'ENSMUST00000034443' => array(
'start' => '122848374',
'end' => '122867397',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cdh15-201'
),
'ENSMUST00000098333' => array(
'start' => '122884151',
'end' => '122915987',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ankrd11-201'
),
'ENSMUST00000098334' => array(
'start' => '122883337',
'end' => '122974793',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ankrd11-001'
),
'ENSMUST00000172906' => array(
'start' => '122883822',
'end' => '122974793',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Ankrd11-002'
),
'ENSMUST00000174833' => array(
'start' => '122906063',
'end' => '122974773',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ankrd11-003'
),
'ENSMUST00000050963' => array(
'start' => '122422020',
'end' => '122423639',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Il17c-001'
),
'ENSMUST00000116412' => array(
'start' => '122476143',
'end' => '122483092',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-001'
),
'ENSMUST00000128472' => array(
'start' => '122476693',
'end' => '122478245',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-005'
),
'ENSMUST00000131934' => array(
'start' => '122480922',
'end' => '122481740',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-009'
),
'ENSMUST00000134127' => array(
'start' => '122476220',
'end' => '122479343',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-007'
),
'ENSMUST00000136253' => array(
'start' => '122480957',
'end' => '122481744',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-008'
),
'ENSMUST00000146634' => array(
'start' => '122476213',
'end' => '122478213',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-006'
),
'ENSMUST00000149925' => array(
'start' => '122476243',
'end' => '122478948',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-004'
),
'ENSMUST00000151855' => array(
'start' => '122476209',
'end' => '122484138',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Ctu2-002'
),
'ENSMUST00000154099' => array(
'start' => '122476213',
'end' => '122481741',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-003'
),
'ENSMUST00000083146' => array(
'start' => '122520568',
'end' => '122520674',
'transcript_biotype' => 'snRNA',
'transcript_name' => 'Gm26497-201'
),
'ENSMUST00000083981' => array(
'start' => '122982837',
'end' => '122982943',
'transcript_biotype' => 'snRNA',
'transcript_name' => 'Gm24445-201'
),
'ENSMUST00000093059' => array(
'start' => '122619471',
'end' => '122622739',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Pabpn1l-001'
),
'ENSMUST00000128586' => array(
'start' => '122683602',
'end' => '122683839',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm15899-001'
),
'ENSMUST00000162198' => array(
'start' => '122697860',
'end' => '122700160',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Gm10612-001'
),
'ENSMUST00000175383' => array(
'start' => '122471627',
'end' => '122471712',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'Gm24366-201'
),
'ENSMUST00000179168' => array(
'start' => '122841731',
'end' => '122842072',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm16378-001'
),
'ENSMUST00000183603' => array(
'start' => '122622265',
'end' => '122622375',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'Mir6396-201'
)
),
'accession_map' => array(
'ENST000' => '9606',
'ENSMUST' => '10090',
'ENSDART' => '7955',
'ENSG000' => '9606',
'ENSMUSG' => '10090',
'ENSDARG' => '7955'
),
'sci_name_map' => array(
(int) 9606 => 'Homo_sapiens',
(int) 10090 => 'Mus_musculus',
(int) 7955 => 'Danio_rerio'
),
'UCSC_links' => array(
(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
),
'expressed_region_arr' => array(
'CIL_00091T_0001' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
)
)
)
$region_arr = array(
'CIL_00091T_0001' => array(
'genes_in_region' => array(
'ENSG00000103335' => array(
[maximum depth reached]
),
'ENSG00000129910' => array(
[maximum depth reached]
),
'ENSG00000129993' => array(
[maximum depth reached]
),
'ENSG00000141012' => array(
[maximum depth reached]
),
'ENSG00000158717' => array(
[maximum depth reached]
),
'ENSG00000167513' => array(
[maximum depth reached]
),
'ENSG00000167515' => array(
[maximum depth reached]
),
'ENSG00000167522' => array(
[maximum depth reached]
),
'ENSG00000170100' => array(
[maximum depth reached]
),
'ENSG00000180422' => array(
[maximum depth reached]
),
'ENSG00000182376' => array(
[maximum depth reached]
),
'ENSG00000198931' => array(
[maximum depth reached]
),
'ENSG00000205015' => array(
[maximum depth reached]
),
'ENSG00000205018' => array(
[maximum depth reached]
),
'ENSG00000205022' => array(
[maximum depth reached]
),
'ENSG00000256982' => array(
[maximum depth reached]
),
'ENSG00000259803' => array(
[maximum depth reached]
),
'ENSG00000259813' => array(
[maximum depth reached]
),
'ENSG00000259877' => array(
[maximum depth reached]
),
'ENSG00000259989' => array(
[maximum depth reached]
),
'ENSG00000260121' => array(
[maximum depth reached]
),
'ENSG00000261226' => array(
[maximum depth reached]
),
'ENSG00000265672' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Adipose',
(int) 1 => 'Adrenal',
(int) 2 => 'Brain',
(int) 3 => 'Breast',
(int) 4 => 'Colon',
(int) 5 => 'Heart',
(int) 6 => 'Kidney',
(int) 7 => 'Liver',
(int) 8 => 'Lung',
(int) 9 => 'Muscle',
(int) 10 => 'Ovary',
(int) 11 => 'Placenta',
(int) 12 => 'Testis',
(int) 13 => 'Colon',
(int) 14 => 'Kidney',
(int) 15 => 'Liver',
(int) 16 => 'Brain',
(int) 17 => 'Breast',
(int) 18 => 'Kidney',
(int) 19 => 'Liver',
(int) 20 => 'Lung',
(int) 21 => 'Breast',
(int) 22 => 'Lung',
(int) 23 => 'Muscle',
(int) 24 => 'Ovary',
(int) 25 => 'Testis',
(int) 26 => 'Muscle',
(int) 27 => 'Adrenal',
(int) 28 => 'Brain',
(int) 29 => 'Breast',
(int) 30 => 'Kidney',
(int) 31 => 'Liver',
(int) 32 => 'Lung',
(int) 33 => 'Muscle',
(int) 34 => 'Ovary',
(int) 35 => 'Placenta',
(int) 36 => 'Testis',
(int) 37 => 'Adrenal',
(int) 38 => 'Brain',
(int) 39 => 'Colon',
(int) 40 => 'Kidney',
(int) 41 => 'Lung',
(int) 42 => 'Ovary',
(int) 43 => 'Kidney',
(int) 44 => 'Liver',
(int) 45 => 'Colon',
(int) 46 => 'Adipose',
(int) 47 => 'Adrenal',
(int) 48 => 'Brain',
(int) 49 => 'Colon',
(int) 50 => 'Heart',
(int) 51 => 'Lung',
(int) 52 => 'Muscle',
(int) 53 => 'Ovary',
(int) 54 => 'Testis',
(int) 55 => 'Liver',
(int) 56 => 'Liver',
(int) 57 => 'Adipose',
(int) 58 => 'Adrenal',
(int) 59 => 'Bladder',
(int) 60 => 'Brain',
(int) 61 => 'Breast',
(int) 62 => 'Colon',
(int) 63 => 'Heart',
(int) 64 => 'Kidney',
(int) 65 => 'Liver',
(int) 66 => 'Lung',
(int) 67 => 'Muscle',
(int) 68 => 'Ovary',
(int) 69 => 'Placenta',
(int) 70 => 'Testis',
(int) 71 => 'Brain',
(int) 72 => 'Breast',
(int) 73 => 'Colon',
(int) 74 => 'Liver',
(int) 75 => 'Lung',
(int) 76 => 'Muscle',
(int) 77 => 'Ovary',
(int) 78 => 'Placenta',
(int) 79 => 'Testis',
(int) 80 => 'Ovary',
(int) 81 => 'Heart',
(int) 82 => 'Placenta',
(int) 83 => 'Adrenal',
(int) 84 => 'Bladder',
(int) 85 => 'Brain',
(int) 86 => 'Breast',
(int) 87 => 'Colon',
(int) 88 => 'Heart',
(int) 89 => 'Kidney',
(int) 90 => 'Liver',
(int) 91 => 'Lung',
(int) 92 => 'Muscle',
(int) 93 => 'Ovary',
(int) 94 => 'Placenta',
(int) 95 => 'Testis',
(int) 96 => 'Bladder',
(int) 97 => 'Colon',
(int) 98 => 'Kidney',
(int) 99 => 'Liver',
(int) 100 => 'Lung',
(int) 101 => 'Ovary',
(int) 102 => 'Lung',
(int) 103 => 'Kidney',
(int) 104 => 'Adipose',
(int) 105 => 'Adrenal',
(int) 106 => 'Breast',
(int) 107 => 'Colon',
(int) 108 => 'Heart',
(int) 109 => 'Kidney',
(int) 110 => 'Liver',
(int) 111 => 'Lung',
(int) 112 => 'Ovary',
(int) 113 => 'Testis',
(int) 114 => 'Liver',
(int) 115 => 'Ovary',
(int) 116 => 'Testis',
(int) 117 => 'Adipose',
(int) 118 => 'Brain',
(int) 119 => 'Breast',
(int) 120 => 'Heart',
(int) 121 => 'Kidney',
(int) 122 => 'Liver',
(int) 123 => 'Lung',
(int) 124 => 'Muscle',
(int) 125 => 'Ovary',
(int) 126 => 'Placenta',
(int) 127 => 'Testis',
(int) 128 => 'Adrenal',
(int) 129 => 'Brain',
(int) 130 => 'Colon',
(int) 131 => 'Ovary',
(int) 132 => 'Placenta',
(int) 133 => 'Testis',
(int) 134 => 'Adipose',
(int) 135 => 'Adrenal',
(int) 136 => 'Brain',
(int) 137 => 'Heart',
(int) 138 => 'Kidney',
(int) 139 => 'Lung',
(int) 140 => 'Ovary',
(int) 141 => 'Placenta',
(int) 142 => 'Kidney',
(int) 143 => 'Brain',
(int) 144 => 'Breast',
(int) 145 => 'Kidney',
(int) 146 => 'Muscle',
(int) 147 => 'Ovary',
(int) 148 => 'Breast',
(int) 149 => 'Bladder',
(int) 150 => 'Heart',
(int) 151 => 'Ovary',
(int) 152 => 'Brain',
(int) 153 => 'Breast',
(int) 154 => 'Colon',
(int) 155 => 'Kidney',
(int) 156 => 'Liver',
(int) 157 => 'Lung',
(int) 158 => 'Muscle',
(int) 159 => 'Adipose',
(int) 160 => 'Adrenal',
(int) 161 => 'Brain',
(int) 162 => 'Breast',
(int) 163 => 'Colon',
(int) 164 => 'Heart',
(int) 165 => 'Kidney',
(int) 166 => 'Liver',
(int) 167 => 'Lung',
(int) 168 => 'Muscle',
(int) 169 => 'Ovary',
(int) 170 => 'Placenta',
(int) 171 => 'Testis',
(int) 172 => 'Breast',
(int) 173 => 'Colon',
(int) 174 => 'Placenta',
(int) 175 => 'Brain',
(int) 176 => 'Liver',
(int) 177 => 'Lung',
(int) 178 => 'Adipose',
(int) 179 => 'Adrenal',
(int) 180 => 'Brain',
(int) 181 => 'Breast',
(int) 182 => 'Colon',
(int) 183 => 'Heart',
(int) 184 => 'Kidney',
(int) 185 => 'Muscle',
(int) 186 => 'Ovary',
(int) 187 => 'Placenta',
(int) 188 => 'Testis',
(int) 189 => 'Adrenal',
(int) 190 => 'Brain',
(int) 191 => 'Breast',
(int) 192 => 'Colon',
(int) 193 => 'Heart',
(int) 194 => 'Lung',
(int) 195 => 'Muscle',
(int) 196 => 'Ovary',
(int) 197 => 'Brain',
(int) 198 => 'Heart',
(int) 199 => 'Muscle',
(int) 200 => 'Lung',
(int) 201 => 'Muscle',
(int) 202 => 'Colon',
(int) 203 => 'Liver',
(int) 204 => 'Adipose',
(int) 205 => 'Adrenal',
(int) 206 => 'Brain',
(int) 207 => 'Breast',
(int) 208 => 'Colon',
(int) 209 => 'Heart',
(int) 210 => 'Kidney',
(int) 211 => 'Muscle',
(int) 212 => 'Ovary',
(int) 213 => 'Testis',
(int) 214 => 'Kidney',
(int) 215 => 'Muscle',
(int) 216 => 'Adipose',
(int) 217 => 'Brain',
(int) 218 => 'Breast',
(int) 219 => 'Colon',
(int) 220 => 'Heart',
(int) 221 => 'Kidney',
(int) 222 => 'Liver',
(int) 223 => 'Muscle',
(int) 224 => 'Ovary',
(int) 225 => 'Placenta',
(int) 226 => 'Adipose',
(int) 227 => 'Adrenal',
(int) 228 => 'Brain',
(int) 229 => 'Breast',
(int) 230 => 'Colon',
(int) 231 => 'Heart',
(int) 232 => 'Kidney',
(int) 233 => 'Liver',
(int) 234 => 'Lung',
(int) 235 => 'Muscle',
(int) 236 => 'Ovary',
(int) 237 => 'Placenta',
(int) 238 => 'Testis',
(int) 239 => 'Bladder',
(int) 240 => 'Brain',
(int) 241 => 'Testis',
(int) 242 => 'Liver',
(int) 243 => 'Placenta',
(int) 244 => 'Testis',
(int) 245 => 'Adrenal',
(int) 246 => 'Brain',
(int) 247 => 'Breast',
(int) 248 => 'Heart',
(int) 249 => 'Kidney',
(int) 250 => 'Liver',
(int) 251 => 'Lung',
(int) 252 => 'Ovary',
(int) 253 => 'Kidney',
(int) 254 => 'Brain',
(int) 255 => 'Breast',
(int) 256 => 'Colon',
(int) 257 => 'Heart',
(int) 258 => 'Kidney',
(int) 259 => 'Liver',
(int) 260 => 'Lung',
(int) 261 => 'Muscle',
(int) 262 => 'Ovary',
(int) 263 => 'Bladder',
(int) 264 => 'Breast',
(int) 265 => 'Heart',
(int) 266 => 'Liver',
(int) 267 => 'Lung',
(int) 268 => 'Placenta',
(int) 269 => 'Adipose',
(int) 270 => 'Bladder',
(int) 271 => 'Brain',
(int) 272 => 'Breast',
(int) 273 => 'Colon',
(int) 274 => 'Heart',
(int) 275 => 'Liver',
(int) 276 => 'Lung',
(int) 277 => 'Ovary',
(int) 278 => 'Placenta',
(int) 279 => 'Testis',
(int) 280 => 'Brain',
(int) 281 => 'Breast',
(int) 282 => 'Colon',
(int) 283 => 'Kidney',
(int) 284 => 'Liver',
(int) 285 => 'Muscle',
(int) 286 => 'Brain',
(int) 287 => 'Heart',
(int) 288 => 'Kidney',
(int) 289 => 'Liver',
(int) 290 => 'Muscle',
(int) 291 => 'Brain',
(int) 292 => 'Breast',
(int) 293 => 'Colon',
(int) 294 => 'Heart',
(int) 295 => 'Kidney',
(int) 296 => 'Liver',
(int) 297 => 'Ovary',
(int) 298 => 'Placenta',
(int) 299 => 'Testis',
(int) 300 => 'Brain',
(int) 301 => 'Liver',
(int) 302 => 'Muscle',
(int) 303 => 'Testis',
(int) 304 => 'Brain',
(int) 305 => 'Muscle',
(int) 306 => 'Testis',
(int) 307 => 'Muscle',
(int) 308 => 'Adipose',
(int) 309 => 'Colon',
(int) 310 => 'Kidney',
(int) 311 => 'Liver',
(int) 312 => 'Lung',
(int) 313 => 'Muscle',
(int) 314 => 'Testis',
(int) 315 => 'Adipose',
(int) 316 => 'Adrenal',
(int) 317 => 'Bladder',
(int) 318 => 'Brain',
(int) 319 => 'Breast',
(int) 320 => 'Colon',
(int) 321 => 'Heart',
(int) 322 => 'Kidney',
(int) 323 => 'Liver',
(int) 324 => 'Lung',
(int) 325 => 'Muscle',
(int) 326 => 'Ovary',
(int) 327 => 'Placenta',
(int) 328 => 'Testis',
(int) 329 => 'Adipose',
(int) 330 => 'Bladder',
(int) 331 => 'Brain',
(int) 332 => 'Breast',
(int) 333 => 'Heart',
(int) 334 => 'Kidney',
(int) 335 => 'Liver',
(int) 336 => 'Lung',
(int) 337 => 'Ovary',
(int) 338 => 'Placenta',
(int) 339 => 'Muscle',
(int) 340 => 'Heart',
(int) 341 => 'Kidney',
(int) 342 => 'Muscle',
(int) 343 => 'Ovary',
(int) 344 => 'Placenta',
(int) 345 => 'Heart',
(int) 346 => 'Brain',
(int) 347 => 'Kidney',
(int) 348 => 'Muscle',
(int) 349 => 'Muscle',
(int) 350 => 'Ovary',
(int) 351 => 'Adipose',
(int) 352 => 'Adrenal',
(int) 353 => 'Brain',
(int) 354 => 'Breast',
(int) 355 => 'Heart',
(int) 356 => 'Kidney',
(int) 357 => 'Lung',
(int) 358 => 'Muscle',
(int) 359 => 'Ovary',
(int) 360 => 'Placenta',
(int) 361 => 'Testis',
(int) 362 => 'Brain',
(int) 363 => 'Bladder',
(int) 364 => 'Ovary',
(int) 365 => 'Adrenal',
(int) 366 => 'Brain',
(int) 367 => 'Kidney',
(int) 368 => 'Lung',
(int) 369 => 'Ovary',
(int) 370 => 'Liver',
(int) 371 => 'Ovary',
(int) 372 => 'Testis',
(int) 373 => 'Adipose',
(int) 374 => 'Adrenal',
(int) 375 => 'Brain',
(int) 376 => 'Breast',
(int) 377 => 'Colon',
(int) 378 => 'Kidney',
(int) 379 => 'Liver',
(int) 380 => 'Lung',
(int) 381 => 'Ovary',
(int) 382 => 'Placenta',
(int) 383 => 'Testis',
(int) 384 => 'Adipose',
(int) 385 => 'Adrenal',
(int) 386 => 'Brain',
(int) 387 => 'Breast',
(int) 388 => 'Colon',
(int) 389 => 'Heart',
(int) 390 => 'Kidney',
(int) 391 => 'Liver',
(int) 392 => 'Lung',
(int) 393 => 'Muscle',
(int) 394 => 'Ovary',
(int) 395 => 'Placenta',
(int) 396 => 'Testis',
(int) 397 => 'Adrenal',
(int) 398 => 'Bladder',
(int) 399 => 'Breast',
(int) 400 => 'Colon',
(int) 401 => 'Kidney',
(int) 402 => 'Liver',
(int) 403 => 'Ovary',
(int) 404 => 'Placenta',
(int) 405 => 'Testis',
(int) 406 => 'Bladder',
(int) 407 => 'Brain',
(int) 408 => 'Colon',
(int) 409 => 'Heart',
(int) 410 => 'Kidney',
(int) 411 => 'Liver',
(int) 412 => 'Lung',
(int) 413 => 'Muscle',
(int) 414 => 'Ovary',
(int) 415 => 'Placenta',
(int) 416 => 'Testis',
(int) 417 => 'Adipose',
(int) 418 => 'Adrenal',
(int) 419 => 'Brain',
(int) 420 => 'Breast',
(int) 421 => 'Colon',
(int) 422 => 'Heart',
(int) 423 => 'Kidney',
(int) 424 => 'Liver',
(int) 425 => 'Lung',
(int) 426 => 'Muscle',
(int) 427 => 'Ovary',
(int) 428 => 'Placenta',
(int) 429 => 'Testis',
(int) 430 => 'Liver',
(int) 431 => 'Ovary',
(int) 432 => 'Placenta',
(int) 433 => 'Testis',
(int) 434 => 'Adrenal',
(int) 435 => 'Brain',
(int) 436 => 'Breast',
(int) 437 => 'Colon',
(int) 438 => 'Heart',
(int) 439 => 'Kidney',
(int) 440 => 'Liver',
(int) 441 => 'Lung',
(int) 442 => 'Testis',
(int) 443 => 'Liver',
(int) 444 => 'Adipose',
(int) 445 => 'Adrenal',
(int) 446 => 'Brain',
(int) 447 => 'Muscle',
(int) 448 => 'Ovary',
(int) 449 => 'Brain',
(int) 450 => 'Adrenal',
(int) 451 => 'Breast',
(int) 452 => 'Adipose',
(int) 453 => 'Breast',
(int) 454 => 'Colon',
(int) 455 => 'Heart',
(int) 456 => 'Kidney',
(int) 457 => 'Liver',
(int) 458 => 'Lung',
(int) 459 => 'Muscle',
(int) 460 => 'Placenta',
(int) 461 => 'Testis',
(int) 462 => 'Kidney',
(int) 463 => 'Lung',
(int) 464 => 'Placenta',
(int) 465 => 'Testis',
(int) 466 => 'Adipose',
(int) 467 => 'Adrenal',
(int) 468 => 'Brain',
(int) 469 => 'Breast',
(int) 470 => 'Colon',
(int) 471 => 'Heart',
(int) 472 => 'Kidney',
(int) 473 => 'Liver',
(int) 474 => 'Lung',
(int) 475 => 'Ovary',
(int) 476 => 'Placenta',
(int) 477 => 'Testis',
(int) 478 => 'Ovary',
(int) 479 => 'Adrenal',
(int) 480 => 'Brain',
(int) 481 => 'Heart',
(int) 482 => 'Ovary',
(int) 483 => 'Testis',
(int) 484 => 'Liver',
(int) 485 => 'Adrenal',
(int) 486 => 'Brain',
(int) 487 => 'Colon',
(int) 488 => 'Lung',
(int) 489 => 'Adrenal',
(int) 490 => 'Colon',
(int) 491 => 'Kidney',
(int) 492 => 'Lung',
(int) 493 => 'Ovary',
(int) 494 => 'Placenta',
(int) 495 => 'Breast',
(int) 496 => 'Kidney',
(int) 497 => 'Ovary',
(int) 498 => 'Placenta',
(int) 499 => 'Adipose',
(int) 500 => 'Adrenal',
(int) 501 => 'Placenta',
(int) 502 => 'Adipose',
(int) 503 => 'Breast',
(int) 504 => 'Ovary',
(int) 505 => 'Placenta',
(int) 506 => 'Brain',
(int) 507 => 'Liver',
(int) 508 => 'Ovary',
(int) 509 => 'Placenta',
(int) 510 => 'Heart',
(int) 511 => 'Adipose',
(int) 512 => 'Adrenal',
(int) 513 => 'Bladder',
(int) 514 => 'Brain',
(int) 515 => 'Breast',
(int) 516 => 'Colon',
(int) 517 => 'Heart',
(int) 518 => 'Kidney',
(int) 519 => 'Liver',
(int) 520 => 'Lung',
(int) 521 => 'Muscle',
(int) 522 => 'Ovary',
(int) 523 => 'Placenta',
(int) 524 => 'Testis',
(int) 525 => 'Brain',
(int) 526 => 'Muscle',
(int) 527 => 'Colon',
(int) 528 => 'Liver',
(int) 529 => 'Ovary',
(int) 530 => 'Adrenal',
(int) 531 => 'Testis',
(int) 532 => 'Adipose',
(int) 533 => 'Adrenal',
(int) 534 => 'Breast',
(int) 535 => 'Colon',
(int) 536 => 'Heart',
(int) 537 => 'Kidney',
(int) 538 => 'Liver',
(int) 539 => 'Lung',
(int) 540 => 'Ovary',
(int) 541 => 'Bladder',
(int) 542 => 'Brain',
(int) 543 => 'Breast',
(int) 544 => 'Heart',
(int) 545 => 'Lung',
(int) 546 => 'Muscle',
(int) 547 => 'Ovary',
(int) 548 => 'Placenta',
(int) 549 => 'Testis',
(int) 550 => 'Adipose',
(int) 551 => 'Adrenal',
(int) 552 => 'Brain',
(int) 553 => 'Breast',
(int) 554 => 'Colon',
(int) 555 => 'Heart',
(int) 556 => 'Kidney',
(int) 557 => 'Liver',
(int) 558 => 'Lung',
(int) 559 => 'Ovary',
(int) 560 => 'Placenta',
(int) 561 => 'Testis',
(int) 562 => 'Lung'
)
)
)
$gene_desc_arr = array(
'ENSG00000103335' => 'piezo-type mechanosensitive ion channel component 1',
'ENSG00000129910' => 'cadherin 15, type 1, M-cadherin (myotubule)',
'ENSG00000129993' => 'core-binding factor, runt domain, alpha subunit 2; translocated to, 3',
'ENSG00000141012' => 'galactosamine (N-acetyl)-6-sulfatase',
'ENSG00000158717' => 'ring finger protein 166',
'ENSG00000167513' => 'chromatin licensing and DNA replication factor 1',
'ENSG00000167515' => 'trafficking protein particle complex 2-like',
'ENSG00000167522' => 'ankyrin repeat domain 11',
'ENSG00000170100' => 'zinc finger protein 778',
'ENSG00000174177' => 'cytosolic thiouridylase subunit 2 homolog (S. pombe)',
'ENSG00000176715' => 'acyl-CoA synthetase family member 3',
'ENSG00000180422' => 'long intergenic non-protein coding RNA 304',
'ENSG00000182376' => null,
'ENSG00000198931' => 'adenine phosphoribosyltransferase',
'ENSG00000205015' => null,
'ENSG00000205018' => null,
'ENSG00000205022' => 'poly(A) binding protein, nuclear 1-like (cytoplasmic)',
'ENSG00000224888' => null,
'ENSG00000256982' => null,
'ENSG00000259803' => 'solute carrier family 22, member 31',
'ENSG00000259813' => null,
'ENSG00000259877' => null,
'ENSG00000259881' => null,
'ENSG00000259989' => null,
'ENSG00000260121' => null,
'ENSG00000260617' => null,
'ENSG00000260659' => null,
'ENSG00000261226' => null,
'ENSG00000261546' => null,
'ENSG00000265672' => 'microRNA 4722',
'ENSG00000268218' => null,
'ENSG00000278341' => null,
'ENSMUSG00000006362' => 'core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)',
'ENSMUSG00000006517' => 'mevalonate (diphospho) decarboxylase',
'ENSMUSG00000006519' => 'cytochrome b-245, alpha polypeptide',
'ENSMUSG00000006585' => 'chromatin licensing and DNA replication factor 1',
'ENSMUSG00000006587' => 'snail family zinc finger 3',
'ENSMUSG00000006589' => 'adenine phosphoribosyl transferase',
'ENSMUSG00000014444' => 'piezo-type mechanosensitive ion channel component 1',
'ENSMUSG00000014470' => 'ring finger protein 166',
'ENSMUSG00000015013' => 'trafficking protein particle complex 2-like',
'ENSMUSG00000015016' => 'acyl-CoA synthetase family member 3',
'ENSMUSG00000015027' => 'galactosamine (N-acetyl)-6-sulfate sulfatase',
'ENSMUSG00000017478' => 'zinc finger CCCH-type containing 18',
'ENSMUSG00000031962' => 'cadherin 15',
'ENSMUSG00000035569' => 'ankyrin repeat domain 11',
'ENSMUSG00000046108' => 'interleukin 17C',
'ENSMUSG00000049482' => 'cytosolic thiouridylase subunit 2 homolog (S. pombe)',
'ENSMUSG00000065080' => 'predicted gene, 26497',
'ENSMUSG00000065915' => 'predicted gene, 24445',
'ENSMUSG00000069867' => 'poly(A)binding protein nuclear 1-like',
'ENSMUSG00000085917' => 'predicted gene 15899',
'ENSMUSG00000090174' => 'predicted gene 10612',
'ENSMUSG00000093124' => 'predicted gene, 24366',
'ENSMUSG00000095762' => 'predicted gene 16378',
'ENSMUSG00000098500' => 'microRNA 6396'
)
$gene_name_arr = array(
'ENSG00000103335' => 'PIEZO1',
'ENSG00000129910' => 'CDH15',
'ENSG00000129993' => 'CBFA2T3',
'ENSG00000141012' => 'GALNS',
'ENSG00000158717' => 'RNF166',
'ENSG00000167513' => 'CDT1',
'ENSG00000167515' => 'TRAPPC2L',
'ENSG00000167522' => 'ANKRD11',
'ENSG00000170100' => 'ZNF778',
'ENSG00000174177' => 'CTU2',
'ENSG00000176715' => 'ACSF3',
'ENSG00000180422' => 'LINC00304',
'ENSG00000182376' => 'RP5-1142A6.8',
'ENSG00000198931' => 'APRT',
'ENSG00000205015' => 'RP11-46C24.3',
'ENSG00000205018' => 'RP11-830F9.6',
'ENSG00000205022' => 'PABPN1L',
'ENSG00000224888' => 'RP5-1142A6.2',
'ENSG00000256982' => 'CTD-2555A7.2',
'ENSG00000259803' => 'SLC22A31',
'ENSG00000259813' => 'RP5-1142A6.5',
'ENSG00000259877' => 'RP11-46C24.7',
'ENSG00000259881' => 'RP11-830F9.5',
'ENSG00000259989' => 'CTD-2555A7.1',
'ENSG00000260121' => 'RP5-1142A6.9',
'ENSG00000260617' => 'RP5-1142A6.7',
'ENSG00000260659' => 'RP11-46C24.6',
'ENSG00000261226' => 'RP11-830F9.7',
'ENSG00000261546' => 'CTD-2555A7.3',
'ENSG00000265672' => 'MIR4722',
'ENSG00000268218' => 'AC137932.4',
'ENSG00000278341' => 'RP5-1142A6.10',
'ENSMUSG00000006362' => 'Cbfa2t3',
'ENSMUSG00000006517' => 'Mvd',
'ENSMUSG00000006519' => 'Cyba',
'ENSMUSG00000006585' => 'Cdt1',
'ENSMUSG00000006587' => 'Snai3',
'ENSMUSG00000006589' => 'Aprt',
'ENSMUSG00000014444' => 'Piezo1',
'ENSMUSG00000014470' => 'Rnf166',
'ENSMUSG00000015013' => 'Trappc2l',
'ENSMUSG00000015016' => 'Acsf3',
'ENSMUSG00000015027' => 'Galns',
'ENSMUSG00000017478' => 'Zc3h18',
'ENSMUSG00000031962' => 'Cdh15',
'ENSMUSG00000035569' => 'Ankrd11',
'ENSMUSG00000046108' => 'Il17c',
'ENSMUSG00000049482' => 'Ctu2',
'ENSMUSG00000065080' => 'Gm26497',
'ENSMUSG00000065915' => 'Gm24445',
'ENSMUSG00000069867' => 'Pabpn1l',
'ENSMUSG00000085917' => 'Gm15899',
'ENSMUSG00000090174' => 'Gm10612',
'ENSMUSG00000093124' => 'Gm24366',
'ENSMUSG00000095762' => 'Gm16378',
'ENSMUSG00000098500' => 'Mir6396'
)
$accession_table = array(
(int) 0 => array(
'region_elements' => array(
'region_element_id' => 'CIL_00091T_0001',
'tax_id' => '9606',
'chromosome' => '16',
'seq_start' => '88690989',
'seq_end' => '89294615',
'region_length' => '603626',
'region_type' => 'VISTA',
'el_id' => 'hs1854'
)
),
(int) 1 => array(
'region_elements' => array(
'region_element_id' => 'CIL_00091T_0002',
'tax_id' => '10090',
'chromosome' => '8',
'seq_start' => '122411841',
'seq_end' => '123013825',
'region_length' => '601984',
'region_type' => 'VISTA',
'el_id' => 'hs1854'
)
)
)
$all_tissues = array(
(int) 0 => 'Adipose',
(int) 27 => 'Adrenal',
(int) 61 => 'Bladder',
(int) 75 => 'Brain',
(int) 126 => 'Breast',
(int) 168 => 'Colon',
(int) 208 => 'Heart',
(int) 247 => 'Kidney',
(int) 296 => 'Liver',
(int) 345 => 'Lung',
(int) 389 => 'Muscle',
(int) 430 => 'Ovary',
(int) 484 => 'Placenta',
(int) 523 => 'Testis'
)
$column_titles = array(
(int) 0 => 'Region Sub-Accession',
(int) 1 => 'Tax ID',
(int) 2 => 'Position',
(int) 3 => 'Region Length'
)
$geneviewer = array(
(int) 9606 => array(
'version' => 'GRCh38',
'coord_key' => 'Homo sapiens',
'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCh38.2bit',
'bwgURI' => '/static/files/GRCh38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 10090 => array(
'version' => 'GRCm38',
'coord_key' => 'Mus musculus',
'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCm38.2bit',
'bwgURI' => '/static/files/GRCm38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 7955 => array(
'version' => 'Zv9',
'coord_key' => 'Danio rerio',
'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
'twoBitURI' => '/static/files/Zv9.2bit',
'bwgURI' => '/static/files/Zv9.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
)
)
$transcript_count = (int) 229
$longest_tissue_len = (int) 8
$transcript_data = array(
'ENST00000301015' => array(
'start' => '88715346',
'end' => '88785211',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-001'
),
'ENST00000327397' => array(
'start' => '88715491',
'end' => '88717611',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-201'
),
'ENST00000419505' => array(
'start' => '88715343',
'end' => '88719890',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'PIEZO1-003'
),
'ENST00000466823' => array(
'start' => '88717722',
'end' => '88720258',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-017'
),
'ENST00000472168' => array(
'start' => '88715816',
'end' => '88716792',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-013'
),
'ENST00000474606' => array(
'start' => '88722982',
'end' => '88726344',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-009'
),
'ENST00000475586' => array(
'start' => '88723947',
'end' => '88726025',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-008'
),
'ENST00000484567' => array(
'start' => '88715343',
'end' => '88718318',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-004'
),
'ENST00000490756' => array(
'start' => '88732464',
'end' => '88732980',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-006'
),
'ENST00000491917' => array(
'start' => '88727074',
'end' => '88727843',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-007'
),
'ENST00000495568' => array(
'start' => '88717023',
'end' => '88720473',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-010'
),
'ENST00000497793' => array(
'start' => '88718972',
'end' => '88720387',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-011'
),
'ENST00000518793' => array(
'start' => '88715343',
'end' => '88716277',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'PIEZO1-015'
),
'ENST00000521877' => array(
'start' => '88715449',
'end' => '88716212',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-014'
),
'ENST00000566414' => array(
'start' => '88722523',
'end' => '88723934',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'PIEZO1-016'
),
'ENST00000289746' => array(
'start' => '89171767',
'end' => '89195492',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CDH15-001'
),
'ENST00000521087' => array(
'start' => '89171767',
'end' => '89183605',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'CDH15-002'
),
'ENST00000524089' => array(
'start' => '89171767',
'end' => '89186192',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CDH15-003'
),
'ENST00000268679' => array(
'start' => '88874858',
'end' => '88977204',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-001'
),
'ENST00000327483' => array(
'start' => '88874858',
'end' => '88941198',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-002'
),
'ENST00000562719' => array(
'start' => '88892285',
'end' => '88902515',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-008'
),
'ENST00000563640' => array(
'start' => '88892399',
'end' => '88977080',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-009'
),
'ENST00000563856' => array(
'start' => '88875525',
'end' => '88881157',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CBFA2T3-004'
),
'ENST00000563920' => array(
'start' => '88876228',
'end' => '88880036',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CBFA2T3-005'
),
'ENST00000564416' => array(
'start' => '88898088',
'end' => '88941200',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-011'
),
'ENST00000566868' => array(
'start' => '88879430',
'end' => '88881313',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'CBFA2T3-007'
),
'ENST00000569443' => array(
'start' => '88892244',
'end' => '88941844',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-010'
),
'ENST00000569464' => array(
'start' => '88881112',
'end' => '88941809',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-006'
),
'ENST00000570046' => array(
'start' => '88901558',
'end' => '88957775',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CBFA2T3-012'
),
'ENST00000268695' => array(
'start' => '88813734',
'end' => '88856966',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'GALNS-001'
),
'ENST00000561812' => array(
'start' => '88836241',
'end' => '88838922',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'GALNS-010'
),
'ENST00000562593' => array(
'start' => '88813735',
'end' => '88845624',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'GALNS-004'
),
'ENST00000562831' => array(
'start' => '88835755',
'end' => '88856575',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'GALNS-009'
),
'ENST00000562931' => array(
'start' => '88832034',
'end' => '88837849',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'GALNS-012'
),
'ENST00000564263' => array(
'start' => '88824789',
'end' => '88827116',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'GALNS-013'
),
'ENST00000565364' => array(
'start' => '88840335',
'end' => '88856842',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'GALNS-003'
),
'ENST00000566563' => array(
'start' => '88835729',
'end' => '88837889',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'GALNS-011'
),
'ENST00000567525' => array(
'start' => '88813736',
'end' => '88856826',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'GALNS-006'
),
'ENST00000567779' => array(
'start' => '88840698',
'end' => '88842045',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'GALNS-007'
),
'ENST00000568311' => array(
'start' => '88855128',
'end' => '88856970',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'GALNS-002'
),
'ENST00000568613' => array(
'start' => '88814323',
'end' => '88856826',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'GALNS-005'
),
'ENST00000569433' => array(
'start' => '88855753',
'end' => '88856931',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'GALNS-008'
),
'ENST00000312838' => array(
'start' => '88696495',
'end' => '88706421',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-001'
),
'ENST00000537718' => array(
'start' => '88696502',
'end' => '88700603',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-007'
),
'ENST00000541206' => array(
'start' => '88696536',
'end' => '88703617',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-002'
),
'ENST00000562499' => array(
'start' => '88701297',
'end' => '88703602',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'RNF166-004'
),
'ENST00000562544' => array(
'start' => '88696499',
'end' => '88706262',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-011'
),
'ENST00000564894' => array(
'start' => '88700756',
'end' => '88701650',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'RNF166-006'
),
'ENST00000565083' => array(
'start' => '88697296',
'end' => '88698183',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'RNF166-010'
),
'ENST00000567408' => array(
'start' => '88696499',
'end' => '88699706',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-012'
),
'ENST00000567844' => array(
'start' => '88697479',
'end' => '88706398',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-003'
),
'ENST00000568683' => array(
'start' => '88697394',
'end' => '88700056',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RNF166-009'
),
'ENST00000569478' => array(
'start' => '88701317',
'end' => '88703241',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'RNF166-005'
),
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'transcript_name' => 'CTD-2555A7.3-001'
),
'ENST00000578292' => array(
'start' => '88716278',
'end' => '88716337',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'MIR4722-201'
),
'ENST00000602042' => array(
'start' => '89268104',
'end' => '89273044',
'transcript_biotype' => 'antisense',
'transcript_name' => 'AC137932.4-001'
),
'ENST00000616106' => array(
'start' => '88708956',
'end' => '88710437',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP5-1142A6.10-001'
),
'ENSMUST00000006525' => array(
'start' => '122629463',
'end' => '122678072',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cbfa2t3-003'
),
'ENSMUST00000064674' => array(
'start' => '122629938',
'end' => '122678175',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cbfa2t3-002'
),
'ENSMUST00000127984' => array(
'start' => '122628739',
'end' => '122699109',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cbfa2t3-001'
),
'ENSMUST00000134045' => array(
'start' => '122639014',
'end' => '122678694',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cbfa2t3-005'
),
'ENSMUST00000142535' => array(
'start' => '122639018',
'end' => '122646466',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Cbfa2t3-007'
),
'ENSMUST00000147374' => array(
'start' => '122643004',
'end' => '122678111',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Cbfa2t3-006'
),
'ENSMUST00000148630' => array(
'start' => '122650028',
'end' => '122698902',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Cbfa2t3-004'
),
'ENSMUST00000006692' => array(
'start' => '122433596',
'end' => '122443422',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Mvd-201'
),
'ENSMUST00000017604' => array(
'start' => '122424772',
'end' => '122432940',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cyba-201'
),
'ENSMUST00000006760' => array(
'start' => '122568015',
'end' => '122573128',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cdt1-201'
),
'ENSMUST00000006762' => array(
'start' => '122454206',
'end' => '122460692',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Snai3-201'
),
'ENSMUST00000006764' => array(
'start' => '122574637',
'end' => '122576907',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Aprt-201'
),
'ENSMUST00000067252' => array(
'start' => '122481698',
'end' => '122551329',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Piezo1-201'
),
'ENSMUST00000123671' => array(
'start' => '122481721',
'end' => '122484780',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-008'
),
'ENSMUST00000126553' => array(
'start' => '122483367',
'end' => '122483869',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-007'
),
'ENSMUST00000128383' => array(
'start' => '122481982',
'end' => '122499885',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Piezo1-001'
),
'ENSMUST00000134304' => array(
'start' => '122482041',
'end' => '122483000',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-006'
),
'ENSMUST00000148497' => array(
'start' => '122485924',
'end' => '122498204',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Piezo1-002'
),
'ENSMUST00000152596' => array(
'start' => '122484865',
'end' => '122485624',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-004'
),
'ENSMUST00000155803' => array(
'start' => '122482080',
'end' => '122482676',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Piezo1-005'
),
'ENSMUST00000156333' => array(
'start' => '122481712',
'end' => '122499886',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Piezo1-003'
),
'ENSMUST00000014614' => array(
'start' => '122466147',
'end' => '122476064',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Rnf166-001'
),
'ENSMUST00000136356' => array(
'start' => '122466862',
'end' => '122468227',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Rnf166-003'
),
'ENSMUST00000148780' => array(
'start' => '122468009',
'end' => '122475688',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Rnf166-002'
),
'ENSMUST00000015157' => array(
'start' => '122611626',
'end' => '122615588',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Trappc2l-201'
),
'ENSMUST00000015160' => array(
'start' => '122775505',
'end' => '122817880',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Acsf3-201'
),
'ENSMUST00000015171' => array(
'start' => '122578238',
'end' => '122611487',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Galns-201'
),
'ENSMUST00000017622' => array(
'start' => '122376609',
'end' => '122417359',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-001'
),
'ENSMUST00000093073' => array(
'start' => '122376643',
'end' => '122417360',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-002'
),
'ENSMUST00000175798' => array(
'start' => '122408018',
'end' => '122410904',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Zc3h18-010'
),
'ENSMUST00000175819' => array(
'start' => '122403340',
'end' => '122411403',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-008'
),
'ENSMUST00000176629' => array(
'start' => '122376681',
'end' => '122417359',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-005'
),
'ENSMUST00000176699' => array(
'start' => '122376644',
'end' => '122383725',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-007'
),
'ENSMUST00000177049' => array(
'start' => '122411325',
'end' => '122416248',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Zc3h18-009'
),
'ENSMUST00000177123' => array(
'start' => '122407843',
'end' => '122417359',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Zc3h18-004'
),
'ENSMUST00000177195' => array(
'start' => '122403270',
'end' => '122406127',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Zc3h18-011'
),
'ENSMUST00000177386' => array(
'start' => '122376648',
'end' => '122389744',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Zc3h18-003'
),
'ENSMUST00000034443' => array(
'start' => '122848374',
'end' => '122867397',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cdh15-201'
),
'ENSMUST00000098333' => array(
'start' => '122884151',
'end' => '122915987',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ankrd11-201'
),
'ENSMUST00000098334' => array(
'start' => '122883337',
'end' => '122974793',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ankrd11-001'
),
'ENSMUST00000172906' => array(
'start' => '122883822',
'end' => '122974793',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Ankrd11-002'
),
'ENSMUST00000174833' => array(
'start' => '122906063',
'end' => '122974773',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ankrd11-003'
),
'ENSMUST00000050963' => array(
'start' => '122422020',
'end' => '122423639',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Il17c-001'
),
'ENSMUST00000116412' => array(
'start' => '122476143',
'end' => '122483092',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-001'
),
'ENSMUST00000128472' => array(
'start' => '122476693',
'end' => '122478245',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-005'
),
'ENSMUST00000131934' => array(
'start' => '122480922',
'end' => '122481740',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-009'
),
'ENSMUST00000134127' => array(
'start' => '122476220',
'end' => '122479343',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-007'
),
'ENSMUST00000136253' => array(
'start' => '122480957',
'end' => '122481744',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-008'
),
'ENSMUST00000146634' => array(
'start' => '122476213',
'end' => '122478213',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ctu2-006'
),
'ENSMUST00000149925' => array(
'start' => '122476243',
'end' => '122478948',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-004'
),
'ENSMUST00000151855' => array(
'start' => '122476209',
'end' => '122484138',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Ctu2-002'
),
'ENSMUST00000154099' => array(
'start' => '122476213',
'end' => '122481741',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ctu2-003'
),
'ENSMUST00000083146' => array(
'start' => '122520568',
'end' => '122520674',
'transcript_biotype' => 'snRNA',
'transcript_name' => 'Gm26497-201'
),
'ENSMUST00000083981' => array(
'start' => '122982837',
'end' => '122982943',
'transcript_biotype' => 'snRNA',
'transcript_name' => 'Gm24445-201'
),
'ENSMUST00000093059' => array(
'start' => '122619471',
'end' => '122622739',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Pabpn1l-001'
),
'ENSMUST00000128586' => array(
'start' => '122683602',
'end' => '122683839',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm15899-001'
),
'ENSMUST00000162198' => array(
'start' => '122697860',
'end' => '122700160',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Gm10612-001'
),
'ENSMUST00000175383' => array(
'start' => '122471627',
'end' => '122471712',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'Gm24366-201'
),
'ENSMUST00000179168' => array(
'start' => '122841731',
'end' => '122842072',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm16378-001'
),
'ENSMUST00000183603' => array(
'start' => '122622265',
'end' => '122622375',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'Mir6396-201'
)
)
$accession_map = array(
'ENST000' => '9606',
'ENSMUST' => '10090',
'ENSDART' => '7955',
'ENSG000' => '9606',
'ENSMUSG' => '10090',
'ENSDARG' => '7955'
)
$sci_name_map = array(
(int) 9606 => 'Homo_sapiens',
(int) 10090 => 'Mus_musculus',
(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
'CIL_00091T_0001' => array(
'genes_in_region' => array(
'ENSG00000103335' => array(
[maximum depth reached]
),
'ENSG00000129910' => array(
[maximum depth reached]
),
'ENSG00000129993' => array(
[maximum depth reached]
),
'ENSG00000141012' => array(
[maximum depth reached]
),
'ENSG00000158717' => array(
[maximum depth reached]
),
'ENSG00000167513' => array(
[maximum depth reached]
),
'ENSG00000167515' => array(
[maximum depth reached]
),
'ENSG00000167522' => array(
[maximum depth reached]
),
'ENSG00000170100' => array(
[maximum depth reached]
),
'ENSG00000180422' => array(
[maximum depth reached]
),
'ENSG00000182376' => array(
[maximum depth reached]
),
'ENSG00000198931' => array(
[maximum depth reached]
),
'ENSG00000205015' => array(
[maximum depth reached]
),
'ENSG00000205018' => array(
[maximum depth reached]
),
'ENSG00000205022' => array(
[maximum depth reached]
),
'ENSG00000256982' => array(
[maximum depth reached]
),
'ENSG00000259803' => array(
[maximum depth reached]
),
'ENSG00000259813' => array(
[maximum depth reached]
),
'ENSG00000259877' => array(
[maximum depth reached]
),
'ENSG00000259989' => array(
[maximum depth reached]
),
'ENSG00000260121' => array(
[maximum depth reached]
),
'ENSG00000261226' => array(
[maximum depth reached]
),
'ENSG00000265672' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Adipose',
(int) 1 => 'Adrenal',
(int) 2 => 'Brain',
(int) 3 => 'Breast',
(int) 4 => 'Colon',
(int) 5 => 'Heart',
(int) 6 => 'Kidney',
(int) 7 => 'Liver',
(int) 8 => 'Lung',
(int) 9 => 'Muscle',
(int) 10 => 'Ovary',
(int) 11 => 'Placenta',
(int) 12 => 'Testis',
(int) 13 => 'Colon',
(int) 14 => 'Kidney',
(int) 15 => 'Liver',
(int) 16 => 'Brain',
(int) 17 => 'Breast',
(int) 18 => 'Kidney',
(int) 19 => 'Liver',
(int) 20 => 'Lung',
(int) 21 => 'Breast',
(int) 22 => 'Lung',
(int) 23 => 'Muscle',
(int) 24 => 'Ovary',
(int) 25 => 'Testis',
(int) 26 => 'Muscle',
(int) 27 => 'Adrenal',
(int) 28 => 'Brain',
(int) 29 => 'Breast',
(int) 30 => 'Kidney',
(int) 31 => 'Liver',
(int) 32 => 'Lung',
(int) 33 => 'Muscle',
(int) 34 => 'Ovary',
(int) 35 => 'Placenta',
(int) 36 => 'Testis',
(int) 37 => 'Adrenal',
(int) 38 => 'Brain',
(int) 39 => 'Colon',
(int) 40 => 'Kidney',
(int) 41 => 'Lung',
(int) 42 => 'Ovary',
(int) 43 => 'Kidney',
(int) 44 => 'Liver',
(int) 45 => 'Colon',
(int) 46 => 'Adipose',
(int) 47 => 'Adrenal',
(int) 48 => 'Brain',
(int) 49 => 'Colon',
(int) 50 => 'Heart',
(int) 51 => 'Lung',
(int) 52 => 'Muscle',
(int) 53 => 'Ovary',
(int) 54 => 'Testis',
(int) 55 => 'Liver',
(int) 56 => 'Liver',
(int) 57 => 'Adipose',
(int) 58 => 'Adrenal',
(int) 59 => 'Bladder',
(int) 60 => 'Brain',
(int) 61 => 'Breast',
(int) 62 => 'Colon',
(int) 63 => 'Heart',
(int) 64 => 'Kidney',
(int) 65 => 'Liver',
(int) 66 => 'Lung',
(int) 67 => 'Muscle',
(int) 68 => 'Ovary',
(int) 69 => 'Placenta',
(int) 70 => 'Testis',
(int) 71 => 'Brain',
(int) 72 => 'Breast',
(int) 73 => 'Colon',
(int) 74 => 'Liver',
(int) 75 => 'Lung',
(int) 76 => 'Muscle',
(int) 77 => 'Ovary',
(int) 78 => 'Placenta',
(int) 79 => 'Testis',
(int) 80 => 'Ovary',
(int) 81 => 'Heart',
(int) 82 => 'Placenta',
(int) 83 => 'Adrenal',
(int) 84 => 'Bladder',
(int) 85 => 'Brain',
(int) 86 => 'Breast',
(int) 87 => 'Colon',
(int) 88 => 'Heart',
(int) 89 => 'Kidney',
(int) 90 => 'Liver',
(int) 91 => 'Lung',
(int) 92 => 'Muscle',
(int) 93 => 'Ovary',
(int) 94 => 'Placenta',
(int) 95 => 'Testis',
(int) 96 => 'Bladder',
(int) 97 => 'Colon',
(int) 98 => 'Kidney',
(int) 99 => 'Liver',
(int) 100 => 'Lung',
(int) 101 => 'Ovary',
(int) 102 => 'Lung',
(int) 103 => 'Kidney',
(int) 104 => 'Adipose',
(int) 105 => 'Adrenal',
(int) 106 => 'Breast',
(int) 107 => 'Colon',
(int) 108 => 'Heart',
(int) 109 => 'Kidney',
(int) 110 => 'Liver',
(int) 111 => 'Lung',
(int) 112 => 'Ovary',
(int) 113 => 'Testis',
(int) 114 => 'Liver',
(int) 115 => 'Ovary',
(int) 116 => 'Testis',
(int) 117 => 'Adipose',
(int) 118 => 'Brain',
(int) 119 => 'Breast',
(int) 120 => 'Heart',
(int) 121 => 'Kidney',
(int) 122 => 'Liver',
(int) 123 => 'Lung',
(int) 124 => 'Muscle',
(int) 125 => 'Ovary',
(int) 126 => 'Placenta',
(int) 127 => 'Testis',
(int) 128 => 'Adrenal',
(int) 129 => 'Brain',
(int) 130 => 'Colon',
(int) 131 => 'Ovary',
(int) 132 => 'Placenta',
(int) 133 => 'Testis',
(int) 134 => 'Adipose',
(int) 135 => 'Adrenal',
(int) 136 => 'Brain',
(int) 137 => 'Heart',
(int) 138 => 'Kidney',
(int) 139 => 'Lung',
(int) 140 => 'Ovary',
(int) 141 => 'Placenta',
(int) 142 => 'Kidney',
(int) 143 => 'Brain',
(int) 144 => 'Breast',
(int) 145 => 'Kidney',
(int) 146 => 'Muscle',
(int) 147 => 'Ovary',
(int) 148 => 'Breast',
(int) 149 => 'Bladder',
(int) 150 => 'Heart',
(int) 151 => 'Ovary',
(int) 152 => 'Brain',
(int) 153 => 'Breast',
(int) 154 => 'Colon',
(int) 155 => 'Kidney',
(int) 156 => 'Liver',
(int) 157 => 'Lung',
(int) 158 => 'Muscle',
(int) 159 => 'Adipose',
(int) 160 => 'Adrenal',
(int) 161 => 'Brain',
(int) 162 => 'Breast',
(int) 163 => 'Colon',
(int) 164 => 'Heart',
(int) 165 => 'Kidney',
(int) 166 => 'Liver',
(int) 167 => 'Lung',
(int) 168 => 'Muscle',
(int) 169 => 'Ovary',
(int) 170 => 'Placenta',
(int) 171 => 'Testis',
(int) 172 => 'Breast',
(int) 173 => 'Colon',
(int) 174 => 'Placenta',
(int) 175 => 'Brain',
(int) 176 => 'Liver',
(int) 177 => 'Lung',
(int) 178 => 'Adipose',
(int) 179 => 'Adrenal',
(int) 180 => 'Brain',
(int) 181 => 'Breast',
(int) 182 => 'Colon',
(int) 183 => 'Heart',
(int) 184 => 'Kidney',
(int) 185 => 'Muscle',
(int) 186 => 'Ovary',
(int) 187 => 'Placenta',
(int) 188 => 'Testis',
(int) 189 => 'Adrenal',
(int) 190 => 'Brain',
(int) 191 => 'Breast',
(int) 192 => 'Colon',
(int) 193 => 'Heart',
(int) 194 => 'Lung',
(int) 195 => 'Muscle',
(int) 196 => 'Ovary',
(int) 197 => 'Brain',
(int) 198 => 'Heart',
(int) 199 => 'Muscle',
(int) 200 => 'Lung',
(int) 201 => 'Muscle',
(int) 202 => 'Colon',
(int) 203 => 'Liver',
(int) 204 => 'Adipose',
(int) 205 => 'Adrenal',
(int) 206 => 'Brain',
(int) 207 => 'Breast',
(int) 208 => 'Colon',
(int) 209 => 'Heart',
(int) 210 => 'Kidney',
(int) 211 => 'Muscle',
(int) 212 => 'Ovary',
(int) 213 => 'Testis',
(int) 214 => 'Kidney',
(int) 215 => 'Muscle',
(int) 216 => 'Adipose',
(int) 217 => 'Brain',
(int) 218 => 'Breast',
(int) 219 => 'Colon',
(int) 220 => 'Heart',
(int) 221 => 'Kidney',
(int) 222 => 'Liver',
(int) 223 => 'Muscle',
(int) 224 => 'Ovary',
(int) 225 => 'Placenta',
(int) 226 => 'Adipose',
(int) 227 => 'Adrenal',
(int) 228 => 'Brain',
(int) 229 => 'Breast',
(int) 230 => 'Colon',
(int) 231 => 'Heart',
(int) 232 => 'Kidney',
(int) 233 => 'Liver',
(int) 234 => 'Lung',
(int) 235 => 'Muscle',
(int) 236 => 'Ovary',
(int) 237 => 'Placenta',
(int) 238 => 'Testis',
(int) 239 => 'Bladder',
(int) 240 => 'Brain',
(int) 241 => 'Testis',
(int) 242 => 'Liver',
(int) 243 => 'Placenta',
(int) 244 => 'Testis',
(int) 245 => 'Adrenal',
(int) 246 => 'Brain',
(int) 247 => 'Breast',
(int) 248 => 'Heart',
(int) 249 => 'Kidney',
(int) 250 => 'Liver',
(int) 251 => 'Lung',
(int) 252 => 'Ovary',
(int) 253 => 'Kidney',
(int) 254 => 'Brain',
(int) 255 => 'Breast',
(int) 256 => 'Colon',
(int) 257 => 'Heart',
(int) 258 => 'Kidney',
(int) 259 => 'Liver',
(int) 260 => 'Lung',
(int) 261 => 'Muscle',
(int) 262 => 'Ovary',
(int) 263 => 'Bladder',
(int) 264 => 'Breast',
(int) 265 => 'Heart',
(int) 266 => 'Liver',
(int) 267 => 'Lung',
(int) 268 => 'Placenta',
(int) 269 => 'Adipose',
(int) 270 => 'Bladder',
(int) 271 => 'Brain',
(int) 272 => 'Breast',
(int) 273 => 'Colon',
(int) 274 => 'Heart',
(int) 275 => 'Liver',
(int) 276 => 'Lung',
(int) 277 => 'Ovary',
(int) 278 => 'Placenta',
(int) 279 => 'Testis',
(int) 280 => 'Brain',
(int) 281 => 'Breast',
(int) 282 => 'Colon',
(int) 283 => 'Kidney',
(int) 284 => 'Liver',
(int) 285 => 'Muscle',
(int) 286 => 'Brain',
(int) 287 => 'Heart',
(int) 288 => 'Kidney',
(int) 289 => 'Liver',
(int) 290 => 'Muscle',
(int) 291 => 'Brain',
(int) 292 => 'Breast',
(int) 293 => 'Colon',
(int) 294 => 'Heart',
(int) 295 => 'Kidney',
(int) 296 => 'Liver',
(int) 297 => 'Ovary',
(int) 298 => 'Placenta',
(int) 299 => 'Testis',
(int) 300 => 'Brain',
(int) 301 => 'Liver',
(int) 302 => 'Muscle',
(int) 303 => 'Testis',
(int) 304 => 'Brain',
(int) 305 => 'Muscle',
(int) 306 => 'Testis',
(int) 307 => 'Muscle',
(int) 308 => 'Adipose',
(int) 309 => 'Colon',
(int) 310 => 'Kidney',
(int) 311 => 'Liver',
(int) 312 => 'Lung',
(int) 313 => 'Muscle',
(int) 314 => 'Testis',
(int) 315 => 'Adipose',
(int) 316 => 'Adrenal',
(int) 317 => 'Bladder',
(int) 318 => 'Brain',
(int) 319 => 'Breast',
(int) 320 => 'Colon',
(int) 321 => 'Heart',
(int) 322 => 'Kidney',
(int) 323 => 'Liver',
(int) 324 => 'Lung',
(int) 325 => 'Muscle',
(int) 326 => 'Ovary',
(int) 327 => 'Placenta',
(int) 328 => 'Testis',
(int) 329 => 'Adipose',
(int) 330 => 'Bladder',
(int) 331 => 'Brain',
(int) 332 => 'Breast',
(int) 333 => 'Heart',
(int) 334 => 'Kidney',
(int) 335 => 'Liver',
(int) 336 => 'Lung',
(int) 337 => 'Ovary',
(int) 338 => 'Placenta',
(int) 339 => 'Muscle',
(int) 340 => 'Heart',
(int) 341 => 'Kidney',
(int) 342 => 'Muscle',
(int) 343 => 'Ovary',
(int) 344 => 'Placenta',
(int) 345 => 'Heart',
(int) 346 => 'Brain',
(int) 347 => 'Kidney',
(int) 348 => 'Muscle',
(int) 349 => 'Muscle',
(int) 350 => 'Ovary',
(int) 351 => 'Adipose',
(int) 352 => 'Adrenal',
(int) 353 => 'Brain',
(int) 354 => 'Breast',
(int) 355 => 'Heart',
(int) 356 => 'Kidney',
(int) 357 => 'Lung',
(int) 358 => 'Muscle',
(int) 359 => 'Ovary',
(int) 360 => 'Placenta',
(int) 361 => 'Testis',
(int) 362 => 'Brain',
(int) 363 => 'Bladder',
(int) 364 => 'Ovary',
(int) 365 => 'Adrenal',
(int) 366 => 'Brain',
(int) 367 => 'Kidney',
(int) 368 => 'Lung',
(int) 369 => 'Ovary',
(int) 370 => 'Liver',
(int) 371 => 'Ovary',
(int) 372 => 'Testis',
(int) 373 => 'Adipose',
(int) 374 => 'Adrenal',
(int) 375 => 'Brain',
(int) 376 => 'Breast',
(int) 377 => 'Colon',
(int) 378 => 'Kidney',
(int) 379 => 'Liver',
(int) 380 => 'Lung',
(int) 381 => 'Ovary',
(int) 382 => 'Placenta',
(int) 383 => 'Testis',
(int) 384 => 'Adipose',
(int) 385 => 'Adrenal',
(int) 386 => 'Brain',
(int) 387 => 'Breast',
(int) 388 => 'Colon',
(int) 389 => 'Heart',
(int) 390 => 'Kidney',
(int) 391 => 'Liver',
(int) 392 => 'Lung',
(int) 393 => 'Muscle',
(int) 394 => 'Ovary',
(int) 395 => 'Placenta',
(int) 396 => 'Testis',
(int) 397 => 'Adrenal',
(int) 398 => 'Bladder',
(int) 399 => 'Breast',
(int) 400 => 'Colon',
(int) 401 => 'Kidney',
(int) 402 => 'Liver',
(int) 403 => 'Ovary',
(int) 404 => 'Placenta',
(int) 405 => 'Testis',
(int) 406 => 'Bladder',
(int) 407 => 'Brain',
(int) 408 => 'Colon',
(int) 409 => 'Heart',
(int) 410 => 'Kidney',
(int) 411 => 'Liver',
(int) 412 => 'Lung',
(int) 413 => 'Muscle',
(int) 414 => 'Ovary',
(int) 415 => 'Placenta',
(int) 416 => 'Testis',
(int) 417 => 'Adipose',
(int) 418 => 'Adrenal',
(int) 419 => 'Brain',
(int) 420 => 'Breast',
(int) 421 => 'Colon',
(int) 422 => 'Heart',
(int) 423 => 'Kidney',
(int) 424 => 'Liver',
(int) 425 => 'Lung',
(int) 426 => 'Muscle',
(int) 427 => 'Ovary',
(int) 428 => 'Placenta',
(int) 429 => 'Testis',
(int) 430 => 'Liver',
(int) 431 => 'Ovary',
(int) 432 => 'Placenta',
(int) 433 => 'Testis',
(int) 434 => 'Adrenal',
(int) 435 => 'Brain',
(int) 436 => 'Breast',
(int) 437 => 'Colon',
(int) 438 => 'Heart',
(int) 439 => 'Kidney',
(int) 440 => 'Liver',
(int) 441 => 'Lung',
(int) 442 => 'Testis',
(int) 443 => 'Liver',
(int) 444 => 'Adipose',
(int) 445 => 'Adrenal',
(int) 446 => 'Brain',
(int) 447 => 'Muscle',
(int) 448 => 'Ovary',
(int) 449 => 'Brain',
(int) 450 => 'Adrenal',
(int) 451 => 'Breast',
(int) 452 => 'Adipose',
(int) 453 => 'Breast',
(int) 454 => 'Colon',
(int) 455 => 'Heart',
(int) 456 => 'Kidney',
(int) 457 => 'Liver',
(int) 458 => 'Lung',
(int) 459 => 'Muscle',
(int) 460 => 'Placenta',
(int) 461 => 'Testis',
(int) 462 => 'Kidney',
(int) 463 => 'Lung',
(int) 464 => 'Placenta',
(int) 465 => 'Testis',
(int) 466 => 'Adipose',
(int) 467 => 'Adrenal',
(int) 468 => 'Brain',
(int) 469 => 'Breast',
(int) 470 => 'Colon',
(int) 471 => 'Heart',
(int) 472 => 'Kidney',
(int) 473 => 'Liver',
(int) 474 => 'Lung',
(int) 475 => 'Ovary',
(int) 476 => 'Placenta',
(int) 477 => 'Testis',
(int) 478 => 'Ovary',
(int) 479 => 'Adrenal',
(int) 480 => 'Brain',
(int) 481 => 'Heart',
(int) 482 => 'Ovary',
(int) 483 => 'Testis',
(int) 484 => 'Liver',
(int) 485 => 'Adrenal',
(int) 486 => 'Brain',
(int) 487 => 'Colon',
(int) 488 => 'Lung',
(int) 489 => 'Adrenal',
(int) 490 => 'Colon',
(int) 491 => 'Kidney',
(int) 492 => 'Lung',
(int) 493 => 'Ovary',
(int) 494 => 'Placenta',
(int) 495 => 'Breast',
(int) 496 => 'Kidney',
(int) 497 => 'Ovary',
(int) 498 => 'Placenta',
(int) 499 => 'Adipose',
(int) 500 => 'Adrenal',
(int) 501 => 'Placenta',
(int) 502 => 'Adipose',
(int) 503 => 'Breast',
(int) 504 => 'Ovary',
(int) 505 => 'Placenta',
(int) 506 => 'Brain',
(int) 507 => 'Liver',
(int) 508 => 'Ovary',
(int) 509 => 'Placenta',
(int) 510 => 'Heart',
(int) 511 => 'Adipose',
(int) 512 => 'Adrenal',
(int) 513 => 'Bladder',
(int) 514 => 'Brain',
(int) 515 => 'Breast',
(int) 516 => 'Colon',
(int) 517 => 'Heart',
(int) 518 => 'Kidney',
(int) 519 => 'Liver',
(int) 520 => 'Lung',
(int) 521 => 'Muscle',
(int) 522 => 'Ovary',
(int) 523 => 'Placenta',
(int) 524 => 'Testis',
(int) 525 => 'Brain',
(int) 526 => 'Muscle',
(int) 527 => 'Colon',
(int) 528 => 'Liver',
(int) 529 => 'Ovary',
(int) 530 => 'Adrenal',
(int) 531 => 'Testis',
(int) 532 => 'Adipose',
(int) 533 => 'Adrenal',
(int) 534 => 'Breast',
(int) 535 => 'Colon',
(int) 536 => 'Heart',
(int) 537 => 'Kidney',
(int) 538 => 'Liver',
(int) 539 => 'Lung',
(int) 540 => 'Ovary',
(int) 541 => 'Bladder',
(int) 542 => 'Brain',
(int) 543 => 'Breast',
(int) 544 => 'Heart',
(int) 545 => 'Lung',
(int) 546 => 'Muscle',
(int) 547 => 'Ovary',
(int) 548 => 'Placenta',
(int) 549 => 'Testis',
(int) 550 => 'Adipose',
(int) 551 => 'Adrenal',
(int) 552 => 'Brain',
(int) 553 => 'Breast',
(int) 554 => 'Colon',
(int) 555 => 'Heart',
(int) 556 => 'Kidney',
(int) 557 => 'Liver',
(int) 558 => 'Lung',
(int) 559 => 'Ovary',
(int) 560 => 'Placenta',
(int) 561 => 'Testis',
(int) 562 => 'Lung'
)
)
)
$accession = array(
'region_elements' => array(
'region_element_id' => 'CIL_00091T_0002',
'tax_id' => '10090',
'chromosome' => '8',
'seq_start' => '122411841',
'seq_end' => '123013825',
'region_length' => '601984',
'region_type' => 'VISTA',
'el_id' => 'hs1854'
)
)
$gene_el = array(
'ENST00000578292' => array(
'Lung' => array(
'average_FPKM' => '0.909',
'stddev_FPKM' => '0.00'
)
)
)
$gene_key = 'ENSG00000265672'
$is_first = false
$tran_el = array(
'Lung' => array(
'average_FPKM' => '0.909',
'stddev_FPKM' => '0.00'
)
)
$tran_key = 'ENST00000578292'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108