C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 24
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000159214 CCDC24 9606 + 1:43991359-43996528 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372318 CCDC24-001 43991608-43996528 protein_coding
  ENST00000460543 CCDC24-011 43991613-43995158 nonsense_mediated_decay
  ENST00000463846 CCDC24-003 43991648-43996528 nonsense_mediated_decay
  ENST00000466180 CCDC24-008 43991842-43996110 protein_coding
  ENST00000472562 CCDC24-010 43995393-43995980 processed_transcript
  ENST00000479055 CCDC24-009 43992222-43996114 processed_transcript
  ENST00000485811 CCDC24-007 43991802-43995856 retained_intron
  ENST00000486064 CCDC24-002 43991359-43996524 nonsense_mediated_decay
  ENST00000486504 CCDC24-006 43991784-43996279 nonsense_mediated_decay
  ENST00000490064 CCDC24-005 43991774-43996155 nonsense_mediated_decay
  ENST00000490563 CCDC24-004 43991666-43996528 retained_intron

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000372318ENST00000460543ENST00000479055ENST00000485811ENST00000486064ENST00000486504ENST00000490064ENST00000490563
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000372318 N/A N/A N/A N/A N/A 3.187±0.00 0.351±0.18 0.223±0.00 N/A 1.427±0.11 6.502±0.00
ENST00000460543 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.333±0.00 N/A
ENST00000479055 N/A N/A 0.756±0.00 0.542±0.00 N/A N/A N/A N/A N/A N/A 15.429±0.00
ENST00000485811 N/A N/A N/A N/A N/A N/A 0.192±0.00 N/A N/A N/A N/A
ENST00000486064 0.322±0.00 0.317±0.00 N/A N/A 0.132±0.00 0.084±0.00 0.132±0.00 N/A 2.203±0.47 N/A N/A
ENST00000486504 N/A N/A N/A N/A 0.152±0.00 N/A N/A N/A N/A N/A N/A
ENST00000490064 N/A 0.866±0.00 0.685±0.00 N/A N/A 0.488±0.00 N/A N/A 0.790±0.00 N/A N/A
ENST00000490563 N/A 0.581±0.00 2.062±0.00 N/A 0.212±0.00 N/A N/A N/A 3.752±0.00 1.081±0.14 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B8 CIL_0009B8_0001 VISTA 1:43734711-44337665
CIL_0008SF CIL_0008SF_0001 VISTA 1:43949748-44550457

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038793 ccdc24 coiled-coil domain containing 24 protein_coding Danio_rerio
ENSMUSG00000078588 Ccdc24 coiled-coil domain containing 24 protein_coding Mus_musculus

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