C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 24
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078588 Ccdc24 10090 - 4:117866524-117872557 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000106422 Ccdc24-001 117869260-117872554 protein_coding
  ENSMUST00000130758 Ccdc24-003 117869765-117871329 processed_transcript
  ENSMUST00000131938 Ccdc24-004 117870143-117872557 nonsense_mediated_decay
  ENSMUST00000154439 Ccdc24-002 117868749-117871295 retained_intron
  ENSMUST00000163974 Ccdc24-009 117867656-117868973 processed_transcript
  ENSMUST00000164853 Ccdc24-006 117866524-117872229 protein_coding
  ENSMUST00000166325 Ccdc24-005 117870540-117872520 protein_coding
  ENSMUST00000167287 Ccdc24-007 117869509-117871101 protein_coding
  ENSMUST00000171052 Ccdc24-008 117869624-117872520 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106422ENSMUST00000131938ENSMUST00000164853ENSMUST00000166325
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 42.181±19.89
ENSMUST00000131938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.005±0.00
ENSMUST00000164853 4.732±3.29 5.805±0.98 4.755±1.74 2.079±0.27 4.935±1.03 0.803±0.24 1.743±0.44 6.534±4.95 10.396±1.25 0.364±0.04 10.056±3.87 1.018±0.55 N/A
ENSMUST00000166325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.734±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599
CIL_0001PP CIL_0001PP_0002 CGP 4:117834506-117875198

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038793 ccdc24 coiled-coil domain containing 24 protein_coding Danio_rerio
ENSG00000159214 CCDC24 coiled-coil domain containing 24 protein_coding Homo_sapiens

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