C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 5 open reading frame 45
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161010 C5orf45 9606 - 5:179835133-179862173 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000292586 C5orf45-001 179837276-179858887 protein_coding
  ENST00000376931 C5orf45-002 179837266-179858808 protein_coding
  ENST00000517338 C5orf45-022 179851093-179858806 processed_transcript
  ENST00000518219 C5orf45-006 179837276-179858808 protein_coding
  ENST00000518235 C5orf45-007 179836634-179858806 protein_coding
  ENST00000518950 C5orf45-025 179837143-179838255 retained_intron
  ENST00000519208 C5orf45-017 179840713-179858838 nonsense_mediated_decay
  ENST00000519213 C5orf45-013 179844174-179858844 nonsense_mediated_decay
  ENST00000519318 C5orf45-012 179847357-179858808 retained_intron
  ENST00000519398 C5orf45-011 179853283-179862173 retained_intron
  ENST00000520150 C5orf45-005 179840240-179858846 retained_intron
  ENST00000520698 C5orf45-008 179836802-179858797 protein_coding
  ENST00000520900 C5orf45-023 179840590-179844325 retained_intron
  ENST00000520995 C5orf45-016 179840921-179858839 nonsense_mediated_decay
  ENST00000521299 C5orf45-014 179837527-179858844 nonsense_mediated_decay
  ENST00000521333 C5orf45-018 179837693-179858817 protein_coding
  ENST00000521675 C5orf45-024 179841269-179844220 retained_intron
  ENST00000522157 C5orf45-021 179842008-179858808 nonsense_mediated_decay
  ENST00000522663 C5orf45-004 179835133-179858860 nonsense_mediated_decay
  ENST00000523084 C5orf45-009 179837276-179858834 protein_coding
  ENST00000523267 C5orf45-010 179837274-179844221 processed_transcript
  ENST00000523737 C5orf45-015 179840809-179858844 nonsense_mediated_decay
  ENST00000523835 C5orf45-020 179842047-179858808 nonsense_mediated_decay
  ENST00000524068 C5orf45-019 179841908-179858809 nonsense_mediated_decay
  ENST00000610475 C5orf45-201 179837277-179842020 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastOvaryPlacentaTestisENST00000518235ENST00000522663
Transcript ID Adrenal Breast Ovary Placenta Testis
ENST00000518235 71.126±0.00 91.593±0.00 N/A N/A N/A
ENST00000522663 N/A N/A 7.135±0.00 26.990±0.00 16.727±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XE CIL_0000XE_0002 CGP 5:179797597-179838078
CIL_0000XF CIL_0000XF_0002 CGP 5:179806398-179862173

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074071 C14H5orf45 chromosome 5 open reading frame 45 protein_coding Danio_rerio
ENSMUSG00000020381 3010026O09Rik RIKEN cDNA 3010026O09 gene protein_coding Mus_musculus

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