C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chromosome 5 open reading frame 45
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522663 C5orf45-004 ENSG00000161010 9606 - 5:179835133-179858860 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000522663
Transcript ID Ovary Placenta Testis
ENST00000522663 7.135±0.00 26.990±0.00 16.727±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XE CIL_0000XE_0002 CGP 5:179797597-179838078
CIL_0000XF CIL_0000XF_0002 CGP 5:179806398-179862173

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000136936 Sqstm1-005 protein_coding Mus_musculus 0 215
ENSMUST00000102774 Sqstm1-001 protein_coding Mus_musculus 0 215
ENSMUST00000015981 Sqstm1-002 protein_coding Mus_musculus 0 215
ENSMUST00000143379 Sqstm1-004 protein_coding Mus_musculus 1e-35 156

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