C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L26
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161970 RPL26 9606 - 17:8377520-8383213 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000293842 RPL26-001 8377520-8383193 protein_coding
  ENST00000578069 RPL26-011 8377526-8380084 retained_intron
  ENST00000578115 RPL26-002 8381784-8383193 retained_intron
  ENST00000578812 RPL26-003 8379145-8383193 protein_coding
  ENST00000582485 RPL26-013 8377544-8382309 protein_coding
  ENST00000582556 RPL26-005 8377549-8383166 protein_coding
  ENST00000583011 RPL26-007 8377563-8383213 protein_coding
  ENST00000583515 RPL26-006 8379815-8382554 protein_coding
  ENST00000584164 RPL26-004 8377521-8383167 protein_coding
  ENST00000584343 RPL26-008 8377679-8383193 protein_coding
  ENST00000584441 RPL26-012 8377538-8379936 protein_coding
  ENST00000584906 RPL26-010 8377563-8382315 nonsense_mediated_decay
  ENST00000585176 RPL26-009 8377610-8383192 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000293842ENST00000578069ENST00000582485ENST00000584164
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000293842 352.577±0.00 452.165±0.00 206.277±0.00 324.831±187.00 442.058±120.49 582.124±12.08 255.869±19.33 381.398±76.71 422.036±213.17 559.962±213.37 460.524±29.76 980.353±862.48 882.735±204.48 284.974±69.00
ENST00000578069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1052.910±0.00 643.029±0.00 409.972±0.00
ENST00000582485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 105.355±0.00 N/A N/A
ENST00000584164 N/A N/A N/A 38.751±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 TAS RNA binding
GO:0003735 IEA:NAS structural constituent of ribosome
GO:0005829 TAS cytosol
GO:0006364 IMP rRNA processing
GO:0006412 IEA:NAS translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0015934 IEA large ribosomal subunit
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0042273 IMP ribosomal large subunit biogenesis
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039641 rpl26 ribosomal protein L26 protein_coding Danio_rerio
ENSMUSG00000060938 Rpl26 ribosomal protein L26 protein_coding Mus_musculus

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