C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain 90
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161996 WDR90 9606 + 16:649311-667833 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000293879 WDR90-002 649417-667830 protein_coding
  ENST00000315764 WDR90-014 665258-667830 protein_coding
  ENST00000420061 WDR90-005 649353-656201 retained_intron
  ENST00000546516 WDR90-007 655058-663433 retained_intron
  ENST00000546896 WDR90-026 666911-667830 protein_coding
  ENST00000546923 WDR90-021 661732-662736 retained_intron
  ENST00000547407 WDR90-008 656275-667829 retained_intron
  ENST00000547543 WDR90-023 663140-666745 processed_transcript
  ENST00000547944 WDR90-013 665184-667830 protein_coding
  ENST00000548448 WDR90-024 665874-666361 retained_intron
  ENST00000548603 WDR90-011 662275-663437 processed_transcript
  ENST00000548844 WDR90-019 658560-661075 processed_transcript
  ENST00000548859 WDR90-017 656433-657357 retained_intron
  ENST00000549024 WDR90-012 661065-667829 retained_intron
  ENST00000549091 WDR90-001 649325-667833 protein_coding
  ENST00000549648 WDR90-004 649353-656201 retained_intron
  ENST00000550593 WDR90-016 652122-653470 retained_intron
  ENST00000550739 WDR90-020 659245-660714 protein_coding
  ENST00000550902 WDR90-022 661588-662224 retained_intron
  ENST00000551100 WDR90-025 666496-667831 protein_coding
  ENST00000552648 WDR90-018 655058-657123 processed_transcript
  ENST00000552683 WDR90-010 657858-663438 retained_intron
  ENST00000552728 WDR90-009 656421-667830 nonsense_mediated_decay
  ENST00000552943 WDR90-003 649311-661075 retained_intron
  ENST00000553080 WDR90-015 664988-667829 retained_intron
  ENST00000615333 WDR90-201 649353-656201 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000293879ENST00000315764ENST00000420061ENST00000546896ENST00000546923ENST00000547407ENST00000547543ENST00000547944ENST00000548603ENST00000549024ENST00000549091ENST00000549648ENST00000551100ENST00000552683ENST00000552728ENST00000552943ENST00000553080
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000293879 0.815±0.00 N/A N/A 0.034±0.00 N/A N/A N/A 0.566±0.00 N/A N/A N/A 4.255±0.00 0.734±0.34 N/A
ENST00000315764 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.894±0.00 N/A N/A N/A N/A
ENST00000420061 N/A N/A 0.324±0.00 N/A N/A 0.296±0.00 N/A N/A 0.554±0.00 N/A N/A N/A N/A N/A
ENST00000546896 N/A N/A N/A N/A N/A N/A N/A 2.481±0.00 N/A N/A N/A N/A N/A N/A
ENST00000546923 N/A N/A N/A N/A N/A N/A N/A 1.266±0.00 N/A N/A 3.356±0.00 N/A N/A N/A
ENST00000547407 N/A N/A N/A N/A 1.806±0.00 0.542±0.00 N/A N/A 0.171±0.00 N/A N/A 3.429±0.00 0.663±0.00 4.588±0.00
ENST00000547543 N/A N/A N/A N/A N/A N/A N/A N/A 0.381±0.14 2.436±0.00 N/A N/A N/A N/A
ENST00000547944 N/A N/A 0.419±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548603 N/A N/A N/A 2.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549024 N/A N/A N/A N/A N/A N/A N/A 0.860±0.69 0.284±0.00 N/A N/A N/A 0.714±0.22 N/A
ENST00000549091 N/A N/A N/A N/A N/A 0.307±0.00 N/A N/A N/A 0.562±0.15 0.422±0.00 4.277±0.00 0.235±0.00 8.423±2.84
ENST00000549648 N/A N/A 0.348±0.00 N/A N/A 0.319±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551100 N/A N/A N/A 0.648±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552683 0.948±0.00 1.614±0.00 0.558±0.00 N/A N/A 0.460±0.00 0.051±0.00 N/A N/A N/A 0.362±0.00 N/A 1.213±0.00 N/A
ENST00000552728 N/A N/A N/A N/A 0.365±0.00 N/A 0.286±0.17 N/A 0.453±0.00 1.632±0.00 N/A N/A 0.473±0.00 N/A
ENST00000552943 N/A N/A 0.363±0.00 N/A N/A 0.103±0.00 N/A 0.233±0.00 0.078±0.00 0.362±0.28 N/A N/A N/A N/A
ENST00000553080 N/A 1.946±0.00 N/A N/A N/A 0.537±0.00 0.530±0.00 1.721±0.00 N/A N/A 0.453±0.00 5.837±0.00 0.892±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GL CIL_0003GL_0002 CGP 16:649311-674174

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079241 wdr90 WD repeat domain 90 protein_coding Danio_rerio
ENSMUSG00000073434 Wdr90 WD repeat domain 90 protein_coding Mus_musculus

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