C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0003GL_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000079241-ENSDARG00000056328 | CGP | 7955 | 24:38998045-39072880  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000056328  (rhot2)ras homolog gene family, member T2 |
ENSDART00000061203 (rhot2-001)
|
39047112-39072880 | protein_coding | |
|
ENSDART00000145390 (rhot2-002)
|
39057250-39061225 | retained_intron | ||
|
ENSDARG00000079241 (wdr90) WD repeat domain 90 |
ENSDART00000109221 (wdr90-001)
|
38998045-39044924 | protein_coding | |
| CIL_0003GL_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000161996-ENSG00000140983 | CGP | 9606 | 16:649311-674174 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000140983 (RHOT2) ras homolog family member T2 |
ENST00000315082 (RHOT2-001)
|
668086-674174 | protein_coding | |
|
ENST00000561711 (RHOT2-011)
|
671917-672817 | retained_intron | ||
|
ENST00000561929 (RHOT2-014)
|
668209-670940 | protein_coding | ||
|
ENST00000561983 (RHOT2-018)
|
668105-671199 | nonsense_mediated_decay | ||
|
ENST00000562333 (RHOT2-017)
|
668187-671993 | nonsense_mediated_decay | ||
|
ENST00000562598 (RHOT2-016)
|
668182-670538 | retained_intron | ||
|
ENST00000562708 (RHOT2-008)
|
668112-670525 | retained_intron | ||
|
ENST00000562957 (RHOT2-019)
|
672792-673537 | retained_intron | ||
|
ENST00000563134 (RHOT2-024)
|
668106-670993 | protein_coding | ||
|
ENST00000563637 (RHOT2-013)
|
668151-671934 | nonsense_mediated_decay | ||
|
ENST00000563776 (RHOT2-027)
|
668105-671162 | retained_intron | ||
|
ENST00000564659 (RHOT2-023)
|
672668-673972 | retained_intron | ||
|
ENST00000565004 (RHOT2-025)
|
671082-673057 | retained_intron | ||
|
ENST00000566214 (RHOT2-007)
|
668151-670773 | nonsense_mediated_decay | ||
|
ENST00000566965 (RHOT2-006)
|
668560-671785 | retained_intron | ||
|
ENST00000567017 (RHOT2-005)
|
668162-671933 | retained_intron | ||
|
ENST00000567589 (RHOT2-026)
|
670528-671312 | retained_intron | ||
|
ENST00000568636 (RHOT2-004)
|
668658-674125 | retained_intron | ||
|
ENST00000568950 (RHOT2-020)
|
668178-672297 | retained_intron | ||
|
ENST00000569197 (RHOT2-021)
|
672749-674165 | protein_coding | ||
|
ENST00000569358 (RHOT2-022)
|
670455-673059 | retained_intron | ||
|
ENST00000569675 (RHOT2-002)
|
668135-674174 | retained_intron | ||
|
ENST00000569706 (RHOT2-010)
|
668132-668881 | retained_intron | ||
|
ENST00000569943 (RHOT2-012)
|
668353-670959 | processed_transcript | ||
|
ENST00000570092 (RHOT2-009)
|
668124-670507 | retained_intron | ||
|
ENST00000570280 (RHOT2-015)
|
668153-671131 | nonsense_mediated_decay | ||
|
ENST00000602564 (RHOT2-028)
|
668180-673308 | retained_intron | ||
|
ENSG00000161996 (WDR90) WD repeat domain 90 |
ENST00000293879 (WDR90-002)
|
649417-667830 | protein_coding | |
|
ENST00000315764 (WDR90-014)
|
665258-667830 | protein_coding | ||
|
ENST00000420061 (WDR90-005)
|
649353-656201 | retained_intron | ||
|
ENST00000546516 (WDR90-007)
|
655058-663433 | retained_intron | ||
|
ENST00000546896 (WDR90-026)
|
666911-667830 | protein_coding | ||
|
ENST00000546923 (WDR90-021)
|
661732-662736 | retained_intron | ||
|
ENST00000547407 (WDR90-008)
|
656275-667829 | retained_intron | ||
|
ENST00000547543 (WDR90-023)
|
663140-666745 | processed_transcript | ||
|
ENST00000547944 (WDR90-013)
|
665184-667830 | protein_coding | ||
|
ENST00000548448 (WDR90-024)
|
665874-666361 | retained_intron | ||
|
ENST00000548603 (WDR90-011)
|
662275-663437 | processed_transcript | ||
|
ENST00000548844 (WDR90-019)
|
658560-661075 | processed_transcript | ||
|
ENST00000548859 (WDR90-017)
|
656433-657357 | retained_intron | ||
|
ENST00000549024 (WDR90-012)
|
661065-667829 | retained_intron | ||
|
ENST00000549091 (WDR90-001)
|
649325-667833 | protein_coding | ||
|
ENST00000549648 (WDR90-004)
|
649353-656201 | retained_intron | ||
|
ENST00000550593 (WDR90-016)
|
652122-653470 | retained_intron | ||
|
ENST00000550739 (WDR90-020)
|
659245-660714 | protein_coding | ||
|
ENST00000550902 (WDR90-022)
|
661588-662224 | retained_intron | ||
|
ENST00000551100 (WDR90-025)
|
666496-667831 | protein_coding | ||
|
ENST00000552648 (WDR90-018)
|
655058-657123 | processed_transcript | ||
|
ENST00000552683 (WDR90-010)
|
657858-663438 | retained_intron | ||
|
ENST00000552728 (WDR90-009)
|
656421-667830 | nonsense_mediated_decay | ||
|
ENST00000552943 (WDR90-003)
|
649311-661075 | retained_intron | ||
|
ENST00000553080 (WDR90-015)
|
664988-667829 | retained_intron | ||
|
ENST00000615333 (WDR90-201)
|
649353-656201 | protein_coding | ||
|
ENSG00000262528 (LA16c-349E10.1) |
ENST00000573609 (LA16c-349E10.1-001)
|
654611-656194 | antisense | |
Expression Patterns
|
