C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 9C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162222 TTC9C 9606 + 11:62728069-62740293 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000294161 TTC9C-003 62728112-62736243 nonsense_mediated_decay
  ENST00000316461 TTC9C-001 62728539-62738636 protein_coding
  ENST00000530625 TTC9C-004 62728069-62735564 protein_coding
  ENST00000532276 TTC9C-005 62735450-62740284 nonsense_mediated_decay
  ENST00000532583 TTC9C-002 62728642-62738603 protein_coding
  ENST00000601045 TTC9C-006 62739948-62740293 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000294161ENST00000316461ENST00000530625ENST00000532276ENST00000532583ENST00000601045
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000294161 N/A N/A 0.239±0.00 N/A N/A N/A N/A N/A 0.702±0.00 N/A N/A N/A N/A 1.752±0.00
ENST00000316461 1.727±0.00 N/A 0.757±0.00 1.505±0.37 1.928±1.24 1.707±1.06 1.543±0.86 1.513±1.44 1.958±0.00 1.968±0.63 4.704±0.00 7.969±4.76 6.994±1.62 3.886±1.14
ENST00000530625 4.927±0.00 N/A N/A 10.926±0.00 3.942±0.00 N/A N/A N/A N/A 2.778±0.00 N/A 2.088±0.90 5.843±0.00 10.059±3.35
ENST00000532276 N/A N/A N/A N/A 1.811±0.00 2.483±0.00 N/A 1.650±1.28 1.737±0.00 1.594±0.00 N/A N/A N/A 4.074±0.00
ENST00000532583 2.259±0.00 4.084±0.00 N/A 2.935±0.35 2.805±0.00 4.047±1.39 0.533±0.00 3.971±0.00 2.136±1.30 2.581±0.00 1.568±0.00 5.585±3.60 4.917±1.42 3.631±0.94
ENST00000601045 N/A N/A N/A N/A N/A N/A N/A 2.335±1.48 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0001 VISTA 11:62298635-62900076

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007025 ttc9c tetratricopeptide repeat domain 9C protein_coding Danio_rerio
ENSMUSG00000071660 Ttc9c tetratricopeptide repeat domain 9C protein_coding Mus_musculus

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