C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 9C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000071660 Ttc9c 10090 - 19:8809075-8819333 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000088092 Ttc9c-002 8811296-8819294 protein_coding
  ENSMUST00000096751 Ttc9c-001 8809075-8819333 protein_coding
  ENSMUST00000148090 Ttc9c-004 8818297-8819232 retained_intron
  ENSMUST00000153281 Ttc9c-003 8811136-8818924 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088092ENSMUST00000096751ENSMUST00000153281
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088092 6.361±0.99 2.561±0.52 7.543±0.00 6.311±3.14 4.713±0.78 4.256±1.20 2.705±0.47 4.879±0.35 3.340±1.32 3.711±0.33 1.558±0.31 7.233±2.08 4.871±1.62 1.654±0.89
ENSMUST00000096751 4.906±2.71 2.137±1.19 7.362±0.00 8.061±4.00 3.319±0.90 3.709±0.66 2.261±0.12 4.533±0.39 7.419±4.88 3.357±0.23 3.029±0.21 4.245±1.73 6.880±2.89 1.716±1.08
ENSMUST00000153281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.350±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000413 IBA protein peptidyl-prolyl isomerization
GO:0003755 IBA peptidyl-prolyl cis-trans isomerase activity
GO:0005528 IBA FK506 binding
GO:0005789 IBA endoplasmic reticulum membrane
GO:0061077 IBA chaperone-mediated protein folding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007025 ttc9c tetratricopeptide repeat domain 9C protein_coding Danio_rerio
ENSG00000162222 TTC9C tetratricopeptide repeat domain 9C protein_coding Homo_sapiens

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